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utility functions for analyzing (fly) calcium imaging data
This could be optional in computeDFF and the region used for computing the background should be passes as a mask.
Need to decide on a convenient format for describing these rois and then implement saving them as part of the imagingTimeseries dataclass.
xarrays appear to not be saved properly to file
I use to_netcdf to save the arrays (F0stack.to_netcdf(sep.join([savepath,'F0stack.nc']))
) and was planning to load them using open_dataset (xr.open_dataset(path2imgdat+sep+'F0stack.nc')
).
It's been a while since I debugged this, so further investigation is necessary.
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