hathewaywill / wrf-mosit Goto Github PK

Greetings, Mr. @HathewayWill!

I am a beginner to the WRF Model and I intended to install it in my computer using your precoded script since I'm not really good at programming. Unfortunately, when I ran the script, it stopped during the library compatibility test stage. I'm not entirely sure what caused it, but based on my observation, the process stopped apparently due to an error during the building of the netcdf-c and netcdf-fortran libraries as shown in the attached screenshots. I also noticed some "warning" lines during the pnetcdf building, although I'm not sure if they're a concern since it apparently ended in a successful installation.

In addition, the building of the hdf5 library appears to have also incurred errors which probably contributed to the premature termination of the process. I noticed that during the library compatibility test stage, the line "cp: cannot stat '/home/brianwrf/WRF/Libs/NETCDF/include/netcdf.inc': No such file or directory" appeared at least twice likely due to the failure in building the netcdf libraries. So the process ended with "Compatibility Compiler Test 1 Failed" before ultimately terminating.

Also, I would like to note that the WRF Model and some of the libraries included in this installation script are not in their latest versions, e.g. WRF 4.5.1 instead of 4.5.2, NetCDF-C instead of 4.9.0, NetCDF-Fortran 4.6.0 instead of 4.6.1.

Attached herewith are the screenshots and the "WRF.MASTER.log" for your perusal. I am hoping for your soonest response on this matter.

Thank you very much, Sir! Happy New Year!

WRF.MASTER.log

Hi,

First, thank you so much for providing this resource. I have WRF running on an AWS instance thanks to your script. Unfortunatley I recently accidently deleted obsgrid.exe while trying to remove old obs so have been trying to recompile a version (intel) on Ubuntu to copy it across. While doing that I have encountered the following error. I'm using the Ubuntu release you mention it has been tested on in the docs on an AWS EC2 instance. I have tried running both GNU and Intel options in your scrip options but no success. I just wanted to let you know this has occured.

Thanks again for your effort in providing this.

Cheers,
Andrew

Enviroment Test 1 Passed
I am going to wait for 3 seconds only ...
Test 2
ifort: remark #10448: Intel(R) Fortran Compiler Classic (ifort) is now deprecated and will be discontinued late 2024. Intel recommends that customers transition now to using the LLVM-based Intel(R) Fortran Compiler (ifx) for continued Windows* and Linux* support, new language support, new language features, and optimizations. Use '-diag-disable=10448' to disable this message.
Assume Fortran 2003: has FLUSH, ALLOCATABLE derived type, and ISO C Binding
SUCCESS test 2 fortran only free format
Enviroment Test 2 Passed

I am going to wait for 3 seconds only ...
Test 3
./WRF-MOSIT.sh: line 24016: icc: command not found
Assume Fortran 2003: has FLUSH, ALLOCATABLE derived type, and ISO C Binding
SUCCESS test 2 fortran only free format
Enviroment Test 3 Passed

I am going to wait for 3 seconds only ...
Test 4
./WRF-MOSIT.sh: line 24030: icc: command not found
ifort: remark #10448: Intel(R) Fortran Compiler Classic (ifort) is now deprecated and will be discontinued late 2024. Intel recommends that customers transition now to using the LLVM-based Intel(R) Fortran Compiler (ifx) for continued Windows* and Linux* support, new language support, new language features, and optimizations. Use '-diag-disable=10448' to disable this message.
ifort: remark #10448: Intel(R) Fortran Compiler Classic (ifort) is now deprecated and will be discontinued late 2024. Intel recommends that customers transition now to using the LLVM-based Intel(R) Fortran Compiler (ifx) for continued Windows* and Linux* support, new language support, new language features, and optimizations. Use '-diag-disable=10448' to disable this message.
ifort: error #10236: File not found: 'TEST_4_fortran+c_c.o'
Assume Fortran 2003: has FLUSH, ALLOCATABLE derived type, and ISO C Binding
SUCCESS test 2 fortran only free format
Enviroment Test 4 Passed

I am going to wait for 3 seconds only ...
cp: cannot stat '/home/ubuntu/WRF_Intel/Libs/NETCDF/include/netcdf.inc': No such file or directory

Library Compatibility Tests
Test 1
ifort: remark #10448: Intel(R) Fortran Compiler Classic (ifort) is now deprecated and will be discontinued late 2024. Intel recommends that customers transition now to using the LLVM-based Intel(R) Fortran Compiler (ifx) for continued Windows* and Linux* support, new language support, new language features, and optimizations. Use '-diag-disable=10448' to disable this message.
01_fortran+c+netcdf_f.f(5): error #5102: Cannot open include file 'netcdf.inc'
INCLUDE 'netcdf.inc'
----------------^
compilation aborted for 01_fortran+c+netcdf_f.f (code 1)
./WRF-MOSIT.sh: line 24056: icc: command not found
ifort: remark #10448: Intel(R) Fortran Compiler Classic (ifort) is now deprecated and will be discontinued late 2024. Intel recommends that customers transition now to using the LLVM-based Intel(R) Fortran Compiler (ifx) for continued Windows* and Linux* support, new language support, new language features, and optimizations. Use '-diag-disable=10448' to disable this message.
ifort: error #10236: File not found: '01_fortran+c+netcdf_f.o'
ifort: error #10236: File not found: '01_fortran+c+netcdf_c.o'
./WRF-MOSIT.sh: line 24060: ./a.out: No such file or directory
Compatibility Compiler Test 1 Failed

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Describe the bug
i have successfully installed wrf using wrf-mosit on ubuntu 22.04 on wsl.
After setting my domain etc in the namelist.wps file, when I run the geogrid program, I get this error:
./geogrid.exe: error while loading shared libraries: libnetcdf.so.7: cannot open shared object file: No such file or directory

I try to use WRF-MOSIT to install Weather Research & Forecasting Model CMAQ (WRF-CMAQ) on Ubuntu 22.04.3 and got the error at CMAQ installation with the following error screen and logfile.

WRF_CMAQ.MASTER.log

Please help me to overcome the error.
Thank you a lot.

Hello - thanks for the script, managed to get WRF installed.

My question is, do I need to run WRF across multiple nodes, ie
mpirun -np 8 ./wrf.exe

Or just the script automatically configure it to the number of nodes?

This is the error I'm experiencing running WRF on 1 node with 16 cores:
mpirun: error while loading shared libraries: libslurm.so.36: cannot open shared object file: No such file or directory

Thank you
Alyce

Describe the bug

I attempted to install the Weather Research & Forecasting Model (WRF) using WRF-MOSIT on Ubuntu 22.04.4 (Windows Sub-Linux Ubuntu) and encountered an error during the MET and METPLUS installation. Here is a screenshot of the error and the logfile:

logscopy.txt

Additional context
The error indicates that I am using Python 3.9.18, but when I checked the Python version, it showed Python 3.10.4.

Describe the bug
A clear and concise description of what the bug is.

To Reproduce
Steps to reproduce the behavior:

1. Go to '...'
2. Click on '....'
3. Scroll down to '....'
4. See error

Expected behavior
A clear and concise description of what you expected to happen.

Screenshots
If applicable, add screenshots to help explain your problem.

Desktop (please complete the following information):

• OS: [e.g. iOS]
• Browser [e.g. chrome, safari]
• Version [e.g. 22]

Smartphone (please complete the following information):

• Device: [e.g. iPhone6]
• OS: [e.g. iOS8.1]
• Browser [e.g. stock browser, safari]
• Version [e.g. 22]

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Dear Dr.HathwayWill,
How are you? When I configure the WRF model I get the below error.Could you please help me?
/bin/rm -f namelist.input ; cp ../test/em_real/namelist.input . )

==========================================================================
build started: Tue Mar 7 12:38:21 PM EAT 2023
build completed: Tue Mar 7 12:38:38 PM EAT 2023

---> Problems building executables, look for errors in the build log <---

Describe the bug
When trying to use WRF-MOSIT postfix configuration sets up

Solution
sudo apt install postfix
select no configuration
sudo apt-get purge --auto-remove postfix

Describe the bug
The website for the environment and compatibility tests are dead and not working. Causing WRF-MOSIT to fail.

--202
4-07-15 12:46:33-- https://www2.mmm.ucar.edu/wrf/OnLineTutorial/compile_tutorial/tar_files/Fortran_C_NETCDF_MPI_tests.tar
Resolving [www2.mmm.ucar.edu](https://www2.mmm.ucar.edu/) ([www2.mmm.ucar.edu](https://www2.mmm.ucar.edu/))... [128.117.13.91](https://128.117.13.91/)
Connecting to [www2.mmm.ucar.edu](https://www2.mmm.ucar.edu/) ([www2.mmm.ucar.edu](https://www2.mmm.ucar.edu/))|128.117.13.91|:443... connected.
HTTP request sent, awaiting response... 403 Forbidden
2024-07-15 12:46:34 ERROR 403: Forbidden.

--2024-07-15 12:46:34-- https://www2.mmm.ucar.edu/wrf/OnLineTutorial/compile_tutorial/tar_files/Fortran_C_tests.tar
Resolving [www2.mmm.ucar.edu](https://www2.mmm.ucar.edu/) ([www2.mmm.ucar.edu](https://www2.mmm.ucar.edu/))... [128.117.13.91](https://128.117.13.91/)
Connecting to [www2.mmm.ucar.edu](https://www2.mmm.ucar.edu/) ([www2.mmm.ucar.edu](https://www2.mmm.ucar.edu/))|128.117.13.91|:443... connected.
HTTP request sent, awaiting response... 403 Forbidden
2024-07-15 12:46:35 ERROR 403: Forbidden.

tar: Fortran_C_tests.tar: Cannot open: No such file or directory
tar: Error is not recoverable: exiting now
tar: Fortran_C_NETCDF_MPI_tests.tar: Cannot open: No such file or directory
tar: Error is not recoverable: exiting now
 
 
 
Environment Testing 
Test 1
f951: Error: Cannot open file ‘TEST_1_fortran_only_fixed.f’
<built-in>: Fatal Error: cannot open input file: TEST_1_fortran_only_fixed.f
compilation terminated.
./WRF-MOSIT.sh: line 23557: ./a.out: No such file or directory
Environment Compiler Test 1 Failed

This bug is on UCAR/NCAR's side for hosting weblinks. Will reach out to them.

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Additional context
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Hello, I was trying to install WRF on a machine with Ubuntu 22 using WRF-MOSIT. The script was running smoothly until I encountered this error:
`
--2024-07-15 12:46:33-- https://www2.mmm.ucar.edu/wrf/OnLineTutorial/compile_tutorial/tar_files/Fortran_C_NETCDF_MPI_tests.tar
Resolving www2.mmm.ucar.edu (www2.mmm.ucar.edu)... 128.117.13.91
Connecting to www2.mmm.ucar.edu (www2.mmm.ucar.edu)|128.117.13.91|:443... connected.
HTTP request sent, awaiting response... 403 Forbidden
2024-07-15 12:46:34 ERROR 403: Forbidden.

--2024-07-15 12:46:34-- https://www2.mmm.ucar.edu/wrf/OnLineTutorial/compile_tutorial/tar_files/Fortran_C_tests.tar
Resolving www2.mmm.ucar.edu (www2.mmm.ucar.edu)... 128.117.13.91
Connecting to www2.mmm.ucar.edu (www2.mmm.ucar.edu)|128.117.13.91|:443... connected.
HTTP request sent, awaiting response... 403 Forbidden
2024-07-15 12:46:35 ERROR 403: Forbidden.

tar: Fortran_C_tests.tar: Cannot open: No such file or directory
tar: Error is not recoverable: exiting now
tar: Fortran_C_NETCDF_MPI_tests.tar: Cannot open: No such file or directory
tar: Error is not recoverable: exiting now

Environment Testing
Test 1
f951: Error: Cannot open file ‘TEST_1_fortran_only_fixed.f’
: Fatal Error: cannot open input file: TEST_1_fortran_only_fixed.f
compilation terminated.
./WRF-MOSIT.sh: line 23557: ./a.out: No such file or directory
Environment Compiler Test 1 Failed

`

It seems that the www2.mmm.ucar.edu website is experiencing accessibility issues.

could you please add wrf-solar?