hartwigmedical Goto Github PK
Name: Hartwig Medical Foundation
Type: Organization
Name: Hartwig Medical Foundation
Type: Organization
ACTIN development interview case
Tools for comparing BAMs and CRAMs
Convert CRAM files stored in GCP to FASTQ
ID system for ICGC projects
Reference data importers
Data portal for exploring and accessing data
Second generation of the ICGC DCC release ETL built on Spark
Welcome to Hartwig Medical Foundation’s documentation site!
Front end application for use with Schuberg Philis connect portal that enables downloading of genomic data from S3 compatible storage
README to follow along with the GCP workshop from HMF
Download, extract and format golden datasets to benchmark pipelines
GRIDSS: the Genomic Rearrangement IDentification Software Suite
Repo for the HMF health checker [OBSOLETE]
Various algorithms for analysing genomics data
Align FASTQ and dedup bams in kubernetes
Run sambamba flagstat in kubernetes
Run data analysis jobs in Kubernetes
Algo's used in the OncoAct pipeline
Describe PEACH
Pipeline of tools to process raw fastq data and produce meaningful genomic data
Run multiple Pipeline5 instances at once
Quality Check scripts [OBSOLETE]
Repo for various RNA experiments
SERVE and dependencies
A post-pipeline validation which compares the results of the unifiedgenotyper against a control VCF as a final QC
Tar flowcell BCL's that are stored at GCP
Small datasets for testing purpose (FASTQ, BAM)
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.