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2020-workflows-paper

Strategies for leveraging workflow systems to streamline large-scale biological analyses

algorithms

Minimal examples of data structures and algorithms in Python

alltitude_fungal_community_analysis

amplicon

Statistics and visualization for amplicon data

angsd_genotyping_workflow

Pipeline based on ANGSD tools for genotypes calling

biobakery_workflows

bioBakery workflows is a collection of workflows and tasks for executing common microbial community analyses using standardized, validated tools and parameters.

bioinformatics-skills

生物信息学技能提升，专注于工具使用与编程

calculate

chip-seq-pipeline2

ENCODE ChIP-seq pipeline

chromonomer_workflow

Workflow for the improvement of genetic maps and genome assemblies based on Chromonomer tools

computerscience

计算机科学基础知识

csbook

计算机类常用电子书整理，并且附带下载链接，包括Java，Python，Linux，Go，C，C++，数据结构与算法，人工智能，计算机基础，面试，设计模式，数据库，前端等书籍

data-graphics

data-mining

数据挖掘+爬虫

deep-learning-from-scratch

《深度学习入门-基于Python的理论与实现》，包含源代码和高清PDF(带书签)；慕课网imooc《深度学习之神经网络(CNN-RNN-GAN)算法原理-实战》；《菜菜的机器学习sklearn》

dna_sequencing_analysis

code for amplicon sequencing analysis

doe_exp3_analysis

epigenetic_wgenome_workflow

Pipeline for DNA methylation and genetic polymorphism analysis from RRBS data

epigenetics_multifactor_workflow

Pipeline for WGBS analysis with multifactorial experimental designs

epigenetics_workflow

Pipeline for RRBS data analysis without a reference genome

eukdetect

free-programming-books

:books: Freely available programming books

fungi_db

gatk_workflow

genome_annotation_workflow

Genome annotation : Tools compilation

genome_assembly

Pipeline for genome assembly using hybrid sequencing strategy

genomics_workflow

Bacterial assembly and annotation pipeline

getting-started-with-genomics-tools-and-resources

Unix, R and python tools for genomics and data science

ggcor

Extended tools for correlation analysis and visualization.

ggcor-1

ggcor备用源，版权归houyunhuang所有，本源仅供应急使用