guyleonard Goto Github PK
Name: Guy Leonard
Type: User
Twitter: guyleonard
Location: Oxford
Blog: http://protists.co.uk
Name: Guy Leonard
Type: User
Twitter: guyleonard
Location: Oxford
Blog: http://protists.co.uk
MMseqs2: ultra fast and sensitive search and clustering suite
A publicly accessible location for access to data and analysis relating to the Moore Foundation project “Life on the Dark Side”: Complex trophic interactions of marine microbial eukaryotes.
:seedling: :clipboard: :arrow_right: :8ball: :arrow_right: :palm_tree: :evergreen_tree: :deciduous_tree: - A quick phylogenetic tree building pipeline!
:apple: :deciduous_tree: A script to create and populate a local database of amino acid sequences combined with taxonomic information, the AA gene predictions can be retrieved from a variety of genome-portals and then used with the Orchard tree building pipeline.
Automatically exported from code.google.com/p/orthagogue
Automates running of OrthoMCL software from http://orthomcl.org/common/downloads/software/v2.0/
A couple of tools I find indispensable for post orthomcl down-stream analysis.
Scripts and data file for An RNAi-dependent punishment for algal elimination in a phototrophic endosymbiosis.
Useful scripts for conducting phylogenomic analyses.
Low-cost fluidic microscope for citizen science
PR2 curation: a shiny app version of the EukRef data curation pipeline
Secretome prediction pipeline
A collection of random scripts I have made over the years, barely any documentation though. Enjoy, be careful!
A simple Perl API to query Reddit
A time-saving tool to change the 'defline' of FASTA files for a range of phylogenetic programs e.g. ClustalX, MrBayes, PhyML
:white_circle: :arrow_right: :mag: :information_source: A suggested workflow, and accompanying scripts, to assemble Single Amplified Genomes (SAGs) from MDA derived Hi/MiSeq (Overlapped) Paired-End Illumina Libraries.
Intuitive local web frontend for sequence BLAST (www search form)
A tool to 'automagically' italicise taxon names, compiled from 839 taxa sampled from NCBI, DOE JGI and BROAD. Currently MS Word only
:seedling: :arrow_right: :deciduous_tree: Add new taxa or taxonomic groups to the NCBI Taxdump files
A few simple tutorials for our lab group sessions.
Help Ukraine - add ribbon with Ukraine flag into the website you manage, show the anti-war message to Russian users, or block them from your service.
An R implementation of the UpSet set visualization technique published by Lex, Gehlenborg, et al..
Web content for Meren Lab
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.