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Name: Vijay Nagarajan
Type: User
Name: Vijay Nagarajan
Type: User
This is the official development repository for BCFtools. To compile, the develop branch of htslib is needed: git clone --branch=develop git://github.com/samtools/htslib.git htslib
Bayesian Evolutionary Analysis Sampling Trees
A powerful toolset for genome arithmetic.
A dotplot generator for large chromosomes
Methods and tools used for assembling the C. mast RC genome
Covid-19 reported cases data and analysis for US states - Last Update : April 7, 2020
DELLY2: Structural variant discovery by integrated paired-end and split-read analysis
ligand receptor cell to cell
additional example files for cytoscape, gephi and neo4j
A quality control analysis tool for high throughput sequencing data
Official code repository for GATK versions 4 and up
Remove CCS reads with remnant PacBio adapter sequences and convert outputs to a compressed .fastq (.fastq.gz).
HTSeq is a Python library to facilitate processing and analysis of data from high-throughput sequencing (HTS) experiments.
Detecting intron retention from RNA-Seq experiments
IsoSeq3 - Scalable De Novo Isoform Discovery from Single-Molecule PacBio Reads
General scripts/code/pipeline for use with downstream analysis of large scale data
Discovering known and novel miRNAs from small RNA sequencing data
microsatellite instability detection using paired tumor-normal
Identify Intra-, Inter-donor variations in bulk or single cell longitudinal dataset
A set of command line tools (in Java) for manipulating high-throughput sequencing (HTS) data and formats such as SAM/BAM/CRAM and VCF.
A software for calculating telomere length
Trinity RNA-Seq de novo transcriptome assembly
A set of tools written in Perl and C++ for working with VCF files, such as those generated by the 1000 Genomes Project.
TSO and polyA trimming of fastq files generated with 10x Visium
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.