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flare-qm's Introduction

1. Simulate ECD spectra

Link:http://blog.molcalx.com.cn/2022/09/27/flare-ecd.html

2. Torsion profiling

Link:http://blog.molcalx.com.cn/2020/01/30/qm-torsion-profile.html

3. Custom force field

Link: http://blog.molcalx.com.cn/2020/12/17/custom-force-field.html

4. Chemistry model

Reference 1,2 and 3

5. Optimizaiton & Frequency calculation

Optimization at BP86-D3/def2-tzvp level:

memory 24 GB 
molecule triazole_zn {
2 1
C            3.311141463382     1.388672716141    -0.132455063797
N            1.884833345231     1.025177023894     0.043484026310
C            1.254025091160    -0.054320546006    -0.457728777982
N           -0.033045892061     0.033162706071    -0.033961339025
N           -0.233960858151     1.139994388482     0.722214403874
C            0.939263466825     1.740097045652     0.765668039406
H            3.803704757611     0.634347732552    -0.772374626260
H            3.368955725442     2.383933786760    -0.615462643757
H            3.799389828311     1.413487992718     0.861690507697
H            1.703430175308    -0.839624143660    -1.082877924916
H            1.144432933625     2.680355668033     1.300493925735
ZN          -1.619013907139    -0.992420975422    -0.232973752388
}
set {
basis def2-tzvp
}
optimize('bp86-d3', dertype='energy')

Optimization followed by frequencies H2O HF/cc-pVDZ:

#! Optimization followed by frequencies H2O HF/cc-pVDZ
molecule h2o {
O
H 1 0.96
H 1 0.96 2 104.5
}
set basis cc-pVDZ
optimize('scf')
scf_e, scf_wfn = frequencies('scf', return_wfn=True, dertype=1)

Reference

  1. PSI4 DFT functionals:https://psicode.org/psi4manual/4.0b5/dft_byfunctional.html
  2. PSI4 Basis sets by elements: https://psicode.org/psi4manual/master/basissets_byelement.html
  3. M. Bursch, J.-M. Mewes, A. Hansen, S. Grimme. Best-Practice DFT Protocols for Basic Molecular Computational Chemistry. Angew. Chem. Int. Ed. 2022, 61, e202205735. https://onlinelibrary.wiley.com/doi/full/10.1002/anie.202205735

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