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cp: cannot stat '/Users/username/Desktop/fasta_files/example.fasta': No such file or directory
Finished creating output file. Now clean up...
Everything done.
Traceback (most recent call last):
  File "rundeepsea.py", line 19, in <module>
    check_call(['cp',infilename,tempdir+'/infile.fasta'])
  File "/usr/lib/python2.7/subprocess.py", line 540, in check_call
    raise CalledProcessError(retcode, cmd)
subprocess.CalledProcessError: Command '['cp', '/Users/username/Desktop/fasta_files/example.fasta', '/tmp/tmpfL0dlh/infile.fasta']' returned non-zero exit status 1

Illegal instruction (core dumped)
...
Traceback (most recent call last):
  File "rundeepsea.py", line 27, in <module>
    check_call(["luajit 2_DeepSEA.lua -test_file_h5 "+tempdir+"/infile.fasta.ref.h5"],shell=True)
  File "/usr/lib/python2.7/subprocess.py", line 540, in check_call
    raise CalledProcessError(retcode, cmd)
subprocess.CalledProcessError: Command '['luajit 2_DeepSEA.lua -test_file_h5 /tmp/tmpk_5oxX/infile.fasta.ref.h5']' returned non-zero exit status 132

vendor_id    : GenuineIntel
cpu family    : 6
model        : 15
model name    : Intel(R) Core(TM)2 CPU          6600  @ 2.40GHz