This meta-repository helps with navigation of the repositories under "EDIorg", belonging to the Environmental Data Initiative (https://environmentaldatainitiative.org). EDI is an NSF-funded project that accellerates curation and archive environmental data, emphasizing data from projects funded by the NSF DEB. Programs served include, but are not limited to, Long Term Research in Environmental Biology [(LTREB), Organization for Biological Field Stations (OBFS), MacroSystems Biology (MSB), and the Long Term Ecological Research Network (LTER).

Metadata Templates: Templates for submitting metadata to EDI.

• Repository: https://github.com/EDIorg/MetadataTemplates

EML Assembly Line: A workflow and set of functions to create EML metadata records using R (based on EML-R package).

• Repository: https://github.com/EDIorg/EMLassemblyline

taxonomyCleanr: A workflow and set of functions to clean your taxonomy data using R.

• Repository: https://github.com/EDIorg/taxonomyCleanr

UnitDB Registry: Database and web-based registry for a measurement unit model; inherited from LTER

• Repository: https://github.com/EDIorg/unit-registry
• deployed at
  • http://unit.lternet.edu/

DM Best Practices: Development area for BP material which will appear on the main EDI website

• Considerable material from several LTER IMC Working Group (e.g, EML Best Practices)
• Repository: https://github.com/EDIorg/dm-best-practices
• Fished material appears at
  • https://environmentaldatainitiative.org/resources/five-phases-of-data-publishing/

Data Packages: Files for individual data packages which are constructed by EDI for researhers.

• Code based on EMLassemblyline
• Repository: https://github.com/EDIorg/DataPackages

Dataset Design: General material for dataset design projects. Individual harmonization projects have their own repos.

• Repository: https://github.com/EDIorg/dataset_design
• more information https://environmentaldatainitiative.org/resources/tools/dataset-design/

ecocomDP: A dataset design pattern and associated R code for ecological community data.

• Repository: https://github.com/EDIorg/ecocomDP
• more information
  • https://environmentaldatainitiative.org/2017/07/07/update-data-management-for-community-survey-data-july-2017/

Data Portal: Code for the EDI Data Portal (website)

• Repository: https://github.com/EDIorg/DataPortal
• deployed at
  • https://portal.edirepository.org/

Data Portal Utilities: Code for interacting with the EDI Data Portal API

• Repository: https://github.com/EDIorg/EDI-utilities

EML Congruence Checker (ECC): Working group material for design of new checks for the ECC

• Repository: https://github.com/EDIorg/ECC
• Examples of check implementation
  • https://portal.edirepository.org > Tools > Evaluate/Upload Data Packages

Upload tweeter: Tweets when a new data package is uploaded to the EDI PASTA data repository

• Repository: https://github.com/EDIorg/pasta-upload-tweeter

workshops: Materials for EDI workshops.

• https://github.com/EDIorg/workshops
• More information about EDI workshops
  • https://environmentaldatainitiative.org/events/training-webinars-workshops/

Tutorials: Documents from our online tutorials.

• Repository: https://github.com/EDIorg/tutorials
• More information about EDI online tutorials
  • https://environmentaldatainitiative.org/events/training-webinars-workshops/

EDI is funded by the National Science Foundation (#1565103, #1629233). Any opinions, findings, and conclusions or recommendations expressed in this material are those of the author(s) and do not necessarily reflect the views of NSF. EDI draws heavily on its prior experience with the LTER Network.