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affiliations

RMarkdown Templates for Managing Academic Affiliations for MS-Word and LaTeX

alfie

alfie is the Anonymous Loci Finder!

an-introduction-to-applied-bioinformatics

Interactive lessons in bioinformatics.

appimagekit

Package desktop applications as AppImages that run on common Linux-based operating systems, such as RHEL, CentOS, openSUSE, SLED, Ubuntu, Fedora, debian and derivatives. Join #AppImage on irc.freenode.net

apresentacoes

Apresentações do meu mestrado/doutorado.

articles

A repository for the source code, notebooks, data, files, and other assets used in the data science and machine learning articles on LearnDataSci

awesome

😎 Awesome lists about all kinds of interesting topics

awesome-datascience

:memo: An awesome Data Science repository to learn and apply for real world problems.

awk-anti-textbook

learn awk by example

bash-oneliner

A collection of handy Bash One-Liners and terminal tricks for data processing and Linux system maintenance.

bash_misc

Bash command reference and custom functions

beamertheme-japeri

A variation of the bjeldbak theme for beamer

begin-latex-in-minutes

📜 Brief Intro to LaTeX for beginners that helps you use LaTeX with ease.

biblioverlap

R-package for pair-wise matching of documents between bibliographic databases

biblioverlap_pipelines

Scripts with complete pipelines for document matching using biblioverlap

bioconda-recipes

Conda recipes for the bioconda channel.

bioinfo

Repo containing bioinfo materials

bioinfo_data_visualization

A set of scripts allowing visualization of sequence data metrics

bioinformatics

:microscope: Path to a free self-taught education in Bioinformatics!

bioinformatics-with-python-cookbook-second-edition

Bioinformatics with Python Cookbook Second Edition, published by Packt

bioinformatics_primer

Bioinformatics with Unix, bash, Make, Python, and parallel

biopython-notebook

Notebooks to introduce biopython

biopython_workshop

A basic introduction to Biopython, intended for a classroom based workshop

bookdown

Authoring Books and Technical Documents with R Markdown

bothrops

Code used to generate the alignment comparison tables for the publication "Brazilian Bothrops diporus, in fact a lineage of Bothrops pubescens: Mitogenomic, Venomic and Ontogenetic studies" (Kleiz et al., 2019)

byrne-euclid

MetaPost + ConTeXt rendition of Oliver Byrne's "The first six books of the Elements of Euclid"

canvasxpress

Repo to store CanvasXpress js and css files

chlorofree

Chlorofree is a tool for chloroplast assembly using from public data. Adapted from Mitofree's assembly module. (Coming soon...)

circlator

A tool to circularize genome assemblies

code_snippets