Someone can provide a virtual disk or something to run data directly? about metagem HOT 1 CLOSED

Hi Jint,

Sorry to hear you are having trouble with the installation, I am happy to help you with your setup.

Could you clarify if you are trying to set up metaGEM on your local machine or on a high performance computer cluster? Are you following the manual installation or using the automated env_setup.sh script? What errors are you encountering?

In case you haven't seen it already, please take a look at the installation documentation or the google colab notebook. Specifically in subsection 2 of the notebook you can see how to install metaGEM on a virtual machine:

# clone metaGEM repo
git clone https://github.com/franciscozorrilla/metaGEM.git

# move into metaGEM folder
cd metaGEM

# create mamba env for faster installation
conda create --prefix ./envs/mamba mamba -c conda-forge

# activate mamba env
source activate envs/mamba

# set up metagem
mamba env create --prefix ./envs/metagem -f envs/metaGEM_env.yml

Please let me know if this installation procedure works for you.

Best,
Francisco

from metagem.