Code Monkey home page Code Monkey logo

mess's Introduction

MESS: Modern Electronic Structure Simulations

Important

๐Ÿ”จ ๐Ÿ’€ โš ๏ธ ๐Ÿ”ง
This project is a constantly evolving work in progress.
Expect bugs and surprising performance cliffs.
Definitely not an official Graphcore product!
๐Ÿ”จ ๐Ÿ’€ โš ๏ธ ๐Ÿ”ง

docs arXiv unit tests pre-commit checks

Motivation

MESS is primarily motivated by the need to demystify the underpinnings of electronic structure simulations. The target audience is the collective molecular machine learning community. We identify this community as anyone working towards accelerating our understanding of atomistic processes by combining physical models (e.g. density functional theory) with methods that learn from data (e.g. deep neural networks).

Minimal Example

Calculate the ground state energy of a single water molecule using the 6-31g basis set and the local density approximation (LDA):

from mess import Hamiltonian, basisset, minimise, molecule

mol = molecule("water")
basis = basisset(mol, basis_name="6-31g")
H = Hamiltonian(basis, xc_method="lda")
E, C, sol = minimise(H)
E

License

The reader is encouraged to fork, edit, remix, and use the contents however they find most useful. All content is covered by the permissve MIT License to encourage this. Our aim is to encourage a truly interdisciplinary approach to accelerate our understanding of molecular scale processes.

Installing

We recommend installing directly from the main branch from github and sharing any feedback as issues.

pip install git+https://github.com/graphcore-research/mess.git

Requires Python 3.10+ and we recommend installing JAX for your target system (e.g. CPU, GPU, etc).

Citation

If you found this library to be useful in academic work, then please cite our arXiv paper

@misc{helal2024mess,
      title={MESS: Modern Electronic Structure Simulations},
      author={Hatem Helal and Andrew Fitzgibbon},
      year={2024},
      eprint={2406.03121},
      archivePrefix={arXiv},
      primaryClass={cs.LG}
}

mess's People

Contributors

hatemhelal avatar

Recommend Projects

  • React photo React

    A declarative, efficient, and flexible JavaScript library for building user interfaces.

  • Vue.js photo Vue.js

    ๐Ÿ–– Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.

  • Typescript photo Typescript

    TypeScript is a superset of JavaScript that compiles to clean JavaScript output.

  • TensorFlow photo TensorFlow

    An Open Source Machine Learning Framework for Everyone

  • Django photo Django

    The Web framework for perfectionists with deadlines.

  • D3 photo D3

    Bring data to life with SVG, Canvas and HTML. ๐Ÿ“Š๐Ÿ“ˆ๐ŸŽ‰

Recommend Topics

  • javascript

    JavaScript (JS) is a lightweight interpreted programming language with first-class functions.

  • web

    Some thing interesting about web. New door for the world.

  • server

    A server is a program made to process requests and deliver data to clients.

  • Machine learning

    Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.

  • Game

    Some thing interesting about game, make everyone happy.

Recommend Org

  • Facebook photo Facebook

    We are working to build community through open source technology. NB: members must have two-factor auth.

  • Microsoft photo Microsoft

    Open source projects and samples from Microsoft.

  • Google photo Google

    Google โค๏ธ Open Source for everyone.

  • D3 photo D3

    Data-Driven Documents codes.