Code Monkey home page Code Monkey logo

visual_sandpile's Introduction

Visual Bak-Tang-Wiesenfeld Sandpile Model for Matlab

This Matlab library helps to visualize the avalanche and power law characteristics of the popular sandpile model.

The library is meant for visualizing the Bak-Tang-Wiesenfeld sandpile model and plotting the sandpile's statistics on the fly. The visualization has been optimized for performance.

General Description of the Sandpile Model

The Bak-Tang-Wiesenfeld sandpile model (also called Abelian Sandpile Model) represents a sandpile to which sand grains are added one by one. It is described in an intuitive way in Per Bak's famous book How nature works: the science of self-organized criticality. The model gives an easily understandable example of the concept of self-organized criticality and shows how large-scale, complex behavior can emerge from local, simple patterns in nature.

As observed in the real world, parts of a sandpile might start "sliding" off its slope when enough grains have accumulated at a location. Once a sand grain has started its sliding movement, it might also bump into other sand grains and cause them to slide. This event is known as "avalanche". In his research, Per Bak has observed that the number of grains that take part in an avalanche (as a measure of the avalanche size) follows a power-law distribution.

A power-law distribution means that some quantity D can be expressed as some power of another quantity s, for example as D(s) = ks^-ฯ„*, where ฯ„ and k are constants. When plotted on a log-log plot, a power-law distribution shows through the plotted data resembling a straight line.

Log-log plot showing avalanche size distribution

The plot shown above has been created from data gathered by this sandpile model. Up to an avalanche size of 100 grains, the data supports the claim of a power-law distribution: The data resembles a straight line, approximated by the graph of a linear fit function shown in green.

The power-law characteristics of the sandpile system are very important for Bak's line of thought. He remarks:

The power law indicates that the stationary state is critical. We conclude that he pile has self-organized into a critical state. -- Bak, P. How nature works : the science of self-organized criticality. New York: Springer, 1996, 57.

In this quote, the terms critical and self-organized jump out. The critical state, in the context of the sandpile model, relates to how individual sand grains behave as a group.

A pile of sand that consists of many randomly arranged sand grains might not have a critical state. In this kind of sandpile, any grain that is added, at any position, will probably not have global effects on the sandpile. A newly added grain might cause a few grains to topple in its neighborhood, but there is no remarkable pattern of topples or avalanches this grain causes.

However, a sandpile that is in a critical state is different. In such a sandpile, a grain that is added at a random position will eventually cause global effects in the sandpile. The added grain might start an avalanche of toppling processes that change the entire geometry of the sandpile, reaching far beyond the local domain. For a sandpile that has a typical conical form, the critical state is reached when its slope has reached a certain angle. Keeping all parameters the same and adding more sand grains, sand sliding off its slope will prevent the sandpile's slope angle from becoming any steeper.

To put it in Bak's words: In a non-critical state, individual grains follow their own local dynamics, while in a critical state, the emergent dynamics are global. In the critical state, a pattern emerges from the observation of the sandpile: Avalanche sizes (and other measurable quantities) show a power-law distribution.

The sandpile does organize itself without external influences into the critical state. It is entirely self-organized. This means that even if grains are initially distributed randomly and not in a specific way triggering a critical state, the sandpile will show critical behavior after adding a certain number of sand grains to arbitrary positions.

How This Sandpile Model Works

In this sandpile model, the sandpile is built onto a square grid of a specified pile_width The total number of positions in the square grid is pile width * pile width, so for a sandpile with a pile_width of 12, 144 grid positions are available.

On every grid position, an arbitrary amount of sand grains can be stacked. However, if the number of sand grains on a grid position is greater than or equal to 4, a toppling event takes place, originating at that grid position.

In a toppling event, four grains get taken away from the originating grid position and are distributed equally among the neighboring grid positions north, east, south, and west of the originating grid position. As a result, the originating grid position possesses four grains less, while the number of grains on all its four neighboring positions has increased by one. This behavior eventually leads to a chain reaction, in which a further toppling event on one of the neighboring positions is caused. Such a chain reaction is called "avalanche". If, through a toppling event, a sand grain is to be added to a position beyond the boundary of the pile, it is ignored and no longer considered in the model. This can be imagined as a sand grain "falling off" the surface on which the sandpile is created.

In this model, new sand grains are added to random grid positions. The sand grains are added one by one, except during toppling or avalanche events. In this case, no grains are added until these events are over. The model is initialized with a random number of up to 3 grains at every grid position. (As noted before, this random initialization is not necessarily critical, the critical behavior evolves over time.)

Matlab Plots for Visualization

During execution of this script, Matlab visualizes the sandpile by means of a sandpile plot and a plot showing the avalanche size distribution. The sandpile plot can be turned off to increase performance.

Sandpile Plot

A sample of the sandpile plot is shown in the picture below. The plot shows a "top view" of the entire pile. The pile has a width of 22 positions, so 22*22=484 positions in total. A square is shown for every grid position. The lighter the square in color, the more grains are stacked on the grid position. On the color scale, there is no discrimination between positions that have four and more grains, all of them are white. A black square indicates that there are no grains placed on that position.

The peach-colored square overlaying a grid position shows the location where the most recent sand grain is dropped. The square is not shown during an avalanche.

The sandpile plot is updated automatically as the model is running.

Matlab sandpile plot

Plot of Avalanche Sizes

The plot of avalanche sizes is a log-log plot that is created and updated as the model runs. It shows the quantity of avalanches and their sizes. In this model, the size of an avalanche is defined as the number of direct and indirect toppling events that were caused by the addition of a single sand grain to the pile.

Through the log-log scale the plot enables an assessment of whether the avalanche distribution follows a power law. As there are note many observations for the biggest avalanches, the plot usually shows some clutter for the biggest avalanches.

Matlab plot of avalanche sizes

Usage

The code is thoroughly documented, the documentation can be accessed through the doc simulateSandpile command. To run the model, call the simulateSandpile function, the only user-facing function in the script.

Configurable input parameters of simulateSandpile are:

  • pile_width: Side length of the square pile

  • no_of_grains: Number of grains that are added one by one to the sandpile as the model runs. The simulation stops after the specified number of grains has been added.

  • draw_speed: Speed of animation of the plots. A speed of 0 skips the sandpile animation entirely, and will only plot a chart of avalanche sizes once the simulation has finished running. A value of 0.5 yields a relatively slow animation, smaller values yield a faster one.

The following code is a simple usage example:

pile_width = 40;      % Pile represented through 40x40 grid
no_of_grains = 4000;  % Run the simulation until 4000 new sand grains have been added
draw_speed = 0.2;      % Animate the pile relatively slow
avalanche_output = simulateSandpile(pile_width, no_of_grains, draw_speed);

The simulateSandpile function returns a single output variable, avalanche_output. This variable is a matrix with the shape max. avalanche size x 2. The matrix contains information about how many avalanches with a specific size occurred during the run. (The avalanche plot description shows how the avalanche size is defined in this model.)

Here is an annotated example of a typical avalanche_output:

% Content of avalanche_output:
[1 50;   % 50 avalanches causing 1 toppling event
 2 32;   % 32 avalanches causing 2 toppling events
 3 11;   % 11 avalanche causing 3 toppling events
 ...];

Download

An archive with the library can be downloaded from the releases page.

Installation

To install the library, extract all files into a folder and add them to your Matlab path.

Contribution

I am happy about any contribution or feedback. Please let me know about your comments via the Issues tab on GitHub.

Acknowledgements

The main source of inspiration for writing this library is Per Bak's book How nature works: the science of self-organized criticality.

The function rldCumsumDiff that repeats copies of array elements is taken from a post byDivakar's on stackoverflow.com.

License

The Visual Bak-Tang-Wiesenfeld Sandpile Model for Matlab is distributed under the MIT License (MIT).

visual_sandpile's People

Stargazers

 avatar  avatar  avatar  avatar  avatar  avatar

Watchers

 avatar  avatar

Recommend Projects

  • React photo React

    A declarative, efficient, and flexible JavaScript library for building user interfaces.

  • Vue.js photo Vue.js

    ๐Ÿ–– Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.

  • Typescript photo Typescript

    TypeScript is a superset of JavaScript that compiles to clean JavaScript output.

  • TensorFlow photo TensorFlow

    An Open Source Machine Learning Framework for Everyone

  • Django photo Django

    The Web framework for perfectionists with deadlines.

  • D3 photo D3

    Bring data to life with SVG, Canvas and HTML. ๐Ÿ“Š๐Ÿ“ˆ๐ŸŽ‰

Recommend Topics

  • javascript

    JavaScript (JS) is a lightweight interpreted programming language with first-class functions.

  • web

    Some thing interesting about web. New door for the world.

  • server

    A server is a program made to process requests and deliver data to clients.

  • Machine learning

    Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.

  • Game

    Some thing interesting about game, make everyone happy.

Recommend Org

  • Facebook photo Facebook

    We are working to build community through open source technology. NB: members must have two-factor auth.

  • Microsoft photo Microsoft

    Open source projects and samples from Microsoft.

  • Google photo Google

    Google โค๏ธ Open Source for everyone.

  • D3 photo D3

    Data-Driven Documents codes.