Related Issues (20)
- CNVkit can't read its own target.bed during batch command HOT 4
- genemetrics result processing
- How to loop over samples cnvkit.py batch HOT 4
- `--access` option resulted in different heatmap HOT 1
- changing ploidy values do not change call outcomes HOT 3
- how to make CNVkit use a defined local Version of R/ Rscript in a local install HOT 2
- cnvkit.py batch - no .cns file
- CNVkit coverage takes too long on CRAM file HOT 1
- CNVKit 0.9.9 Batch mode not producing CNS HOT 1
- CNVKit 0.9.9 Batch mode has inconsistent CN and log2Ratio HOT 1
- The interpretation of results
- NameError: name 'GC_MIN_FRACTION' is not defined HOT 1
- Rscript runtime Error occurred HOT 10
- guess_baits.py into target triggers "TypeError: sequence item 0: expected str instance, numpy.float64 found" error
- genemetrics -m flag HOT 1
- Targets: 3948 (1.4789%) bins failed filters (log2 < -5.0, log2 > 5.0, spread > 1.0) HOT 3
- Docker needed HOT 2
- Examining conflicts takes forever installing cnvkit with conda HOT 3
- genemetrics result different between 0.9.8 and 0.9.9 HOT 1
- Bias corrections
Recommend Projects
-
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
-
Vue.js
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
-
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
-
TensorFlow
An Open Source Machine Learning Framework for Everyone
-
Django
The Web framework for perfectionists with deadlines.
-
Laravel
A PHP framework for web artisans
-
D3
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
-
Recommend Topics
-
javascript
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
-
web
Some thing interesting about web. New door for the world.
-
server
A server is a program made to process requests and deliver data to clients.
-
Machine learning
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
-
Visualization
Some thing interesting about visualization, use data art
-
Game
Some thing interesting about game, make everyone happy.
Recommend Org
-
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
-
Microsoft
Open source projects and samples from Microsoft.
-
Google
Google ❤️ Open Source for everyone.
-
Alibaba
Alibaba Open Source for everyone
-
D3
Data-Driven Documents codes.
-
Tencent
China tencent open source team.
from cnvkit.