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followers: 111.0 following: 65.0 repos: 68.0 gists: 0.0

Name: Eike Steinig

Type: User

Company: Victorian Infectious Disease Reference Laboratory (VIDRL), The Doherty Institute for Infection and Immunity (PDI)

Bio: Bioinformatics | Infectious Diseases | Nanopore | Metagenomic Diagnostics | Software Development

Location: Melbourne, Australia

Eike Steinig's Projects

thicket icon thicket

Parallel bootstrapping for maximum-likelihood phylogenies wrapping RAxML-NG, PhyML and FastTree :herb:

tonic icon tonic

Implements a dangerous configuration, not for general use

treetime icon treetime

Maximum likelihood inference of time stamped phylogenies and ancestral reconstruction

unicycler icon unicycler

hybrid assembly pipeline for bacterial genomes

vipr icon vipr

Assembly and intrahost / low-frequency variant calling for viral samples

vircov icon vircov

Viral genome coverage evaluation for metagenomic diagnostics :drop_of_blood:

wf-artic icon wf-artic

ARTIC SARS-CoV-2 workflow and reporting

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