ericmjl Goto Github PK

probabilistic-programming-tutorial

probability-distributions-with-python

A talk on what probability distributions are, using Python

probability-reassortment

protein-convolutional-nets

Part of my thesis work. Doing convolutional neural nets on protein graphs to make predictions.

protein-interaction-network

Computes a molecular graph for protein structures.

protein-rnn-autoencoder

RNN auto-encoder for protein sequences.

protein-systematic-characterization

All our protocols, data, analysis, and papers related to this project are stored here.

pycodestyle-tutorial

Get familiar with Python coding styles, idioms, and get set up to do automatic linting!

pycon

Website for PyCon

pycon2016-django

pycon2017_crypto_tutorial

Applied Modern Cryptography in Python (PyCon 2017)

pydna

Double stranded DNA & simulation of homologous recombination, Gibson assembly, cut&paste cloning in Python and Jupyter notebooks

pyds-cli

Helping you manage your data science projects sanely.

pyflatten

A utility for flattening nested data structures into an array.

pygcn

Graph Convolutional Networks in PyTorch

pyjanitor-feedstock

A conda-smithy repository for pyjanitor.

pymc3-models

Default models built on top of PyMC3.

pymc4

A high-level probabilistic programming interface for TensorFlow Probability

pyprojroot

Finding project directories in Python (data science) projects, just like there R rprojroot and here packages

pyprot

PyProt makes working with protein files very convenient. It supports popular protein structure file formats such as PDB and MOL2.

pypy_stats

basic statistical distribution functions re-implemented in pure Python for PyPy

pyro-testing

Testing out Pyro.

pyscript

pytest-datadir

pytest plugin for manipulating test data directories and files

pytest-regressions

Pytest plugin for regression testing: https://pytest-regressions.readthedocs.io

python-command-line

How to make a Python module or package accessible via command line.

python-hacking

In which I try out all sorts of Python hacks.

python-scratch

A PyScript/browser-based Python scratch space for anyone to start coding Python

python-scriptures

python-scriptures is a Python package and regular expression library for validating, extracting, and normalizing biblical scripture references from blocks of text.

pytorch-playground

In which I play around with PyTorch.