Egon Willighagen's Projects
Chemical Information from the Web
Minimal entry point to inform about WikiCite
Cache of Chemistry in Wikidata
Github mirror of "wikidata/query/deploy" - our actual code is hosted with Gerrit (please see https://www.mediawiki.org/wiki/Developer_access for contributing
Creation of human corona virus gene/protein mapping database
Repository to coordinate getting Wikidata compounds into PubChem
Copy of the wikidataBots repository on BitBucket.
Conference proceedings paper (in progress) for the ICCS 2018 poster: https://figshare.com/articles/Wikidata_and_Scholia_as_a_hub_linking_chemical_knowledge/6356027
Prototype wikidata portal project.
A full setup to start Wikibase and an OpenRefine reconciliation service point to it (legacy code)
Java library for WikiPathways webservice
Mapping WikiPathways to chromosomes
WikiPathways Database
The main web site for the WikiPathways project.
Summaries of WikiPathways data using the SPARQL end point and d3.js and derived libraries.
Jupyter Notebook SPARQL queries against the WikiPathways SPARQL Endpoint
Code to create WikiPathways SD files.
Winter Solstice Challenge 2017
A WordPress plugin to sync content with a GitHub repository (or Jekyll site)
Material for the the Deployment Workshop
Plugin for PathVisio that provides a WikiPathways client.
Java source for conversion of WikiPathways GPML to triples
A tool to perform pathway enrichment analysis on differential gene expression contrasts using WikiPathways pathways
Scripts for loading the WP inferred interaction triples into Virtuoso.
This is the git repository matching the Bioconductor package xcms: LC/MS and GC/MS Data Analysis
React
Typescript
Django
Laravel
Facebook
Microsoft
Google
Alibaba
D3
Tencent