The CBRG is a group that meets weekly on Wednesdays from 11 AM to Noon at the Michelle Winn Conference room in the Duke Molecular Physiology Department (DMPI)

This package contains relevant data, files, and functions for this reading groups

All meetups will be live-streamed and recorded here -

You can install this package from GitHub with:

# install.packages("remotes")
remotes::install_github("BAREJAA/CBRG", force = TRUE)

This package will be frequently updated, so please ensure that you also frequently re-install this package (“frequent” being around once a week if you would like to keep up-to-date)

To launch a presentation for a particular meetup (e.g. meetup 1), run the following

CBRG::launch_slides(1)

To launch an R Markdown file for in-class activities, run the following

CBRG::launch_project(1)

To see the corresponding file with ALL the code, set the show_answers = parameter to TRUE

CBRG::launch_project(1, show_answers = TRUE)

To launch the homework R Markdown files, use the function launch_exercise() (which works just like launch_project())

If you have any questions or would like to introduce yourself, you can do so by using this Discussions page. You can also use this page to post information you think others might find useful, and submit ideas and suggestions for how to improve this group/package

If you notice something wrong with the package, you can open an issue on the Issues page, and we will try to fix your problem

Our goal is to work through various relevant books, beginning with the following - Computational Genomics with R by Prof. Altuna Akalin

and Omics Data Analysis by Prof. Laurent Gatto
Laurent Gatto and Axelle Loriot. UCLouvain-CBIO/WSBIM2122: Omics data analysis. https://github.com/UCLouvain-CBIO/WSBIM2122.

We will also discuss relevant examples from other sources

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