The CBRG is a group that meets weekly on Wednesdays from 11 AM to Noon at the Michelle Winn Conference room in the Duke Molecular Physiology Department (DMPI)
This package contains relevant data, files, and functions for this reading groups
All meetups will be live-streamed and recorded here -
You can install this package from GitHub with:
# install.packages("remotes")
remotes::install_github("BAREJAA/CBRG", force = TRUE)
This package will be frequently updated, so please ensure that you also frequently re-install this package (“frequent” being around once a week if you would like to keep up-to-date)
To launch a presentation for a particular meetup (e.g. meetup 1), run the following
CBRG::launch_slides(1)
To launch an R Markdown file for in-class activities, run the following
CBRG::launch_project(1)
To see the corresponding file with ALL the code, set the
show_answers =
parameter to TRUE
CBRG::launch_project(1, show_answers = TRUE)
To launch the homework R Markdown files, use the function
launch_exercise()
(which works just like launch_project()
)
If you have any questions or would like to introduce yourself, you can do so by using this Discussions page. You can also use this page to post information you think others might find useful, and submit ideas and suggestions for how to improve this group/package
If you notice something wrong with the package, you can open an issue on the Issues page, and we will try to fix your problem
Our goal is to work through various relevant books, beginning with the following - Computational Genomics with R by Prof. Altuna Akalin
and Omics Data
Analysis by
Prof. Laurent Gatto
Laurent Gatto and Axelle Loriot. UCLouvain-CBIO/WSBIM2122: Omics data
analysis. https://github.com/UCLouvain-CBIO/WSBIM2122.
We will also discuss relevant examples from other sources
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