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hdf5

Official HDF5® Library Repository

hermes-2

Hot ion drift-reduced plasma fluid model

hermes-3

Multifluid drift reduced fluid model

hermes-grids

Grids for hermes-2 testing

https-everywhere

A browser extension that encrypts your communications with many websites that offer HTTPS but still allow unencrypted connections.

ics2caldav

pull ics calendars and add the data to a caldav one

images

ipygany

3-D Scientific Visualization in the Jupyter Notebook

latexdiff

Compares two latex files and marks up significant differences between them. Releases on www.ctan.org and mirrors

mangareader

merging-filaments

Simulation of reconnection during merging of current filaments

multimpi

neutrals

neutrals API for BOUT++

orangefs

Official repository for PVFS/OrangeFS

osa

papers

Data from published papers

plasmapy.github.io

PlasmaPy Website

py-fortranformat

pygments

Pygments is a generic syntax highlighter written in Python

pysam

Pysam is a Python module for reading and manipulating SAM/BAM/VCF/BCF files. It's a lightweight wrapper of the htslib C-API, the same one that powers samtools, bcftools, and tabix.

python-deprecated

Python @deprecated decorator to deprecate old python functions

python-semver

Python package to work with Semantic Versioning (https://semver.org/)

rnaseqeval

A tool for evaluating RNA seq mapping

samscripts

sd1d

One-dimensional plasma-neutral simulation for SOL and divertor studies

test

unheatmap

Unheatmap - get data from heatmaps

vtk

xarray

N-D labeled arrays and datasets in Python

xbout.modules.hermes