Atlas of non-human primate basal ganglia, developed in collaboration with the BRAIN Initiative Cell Census Network (BICCN).

Curate your taxonomy in 3 simple steps:

1. Get Taxonomy Development Tools
2. Load your data
3. Browse

Pull the latest TDT docker image via following the steps defined in the project GitHub Container Registry.

docker pull ghcr.io/brain-bican/taxonomy-development-tools:latest

Place your data (ex. AIT115_annotation_sheet.tsv) and configuration file (ex. ingestion_config.yaml) into your project's input_data folder.

Run following command in your project root folder to ingest your data files:

bash ./run.sh make load_data

Run following command in your project root folder to run the online data editor:

bash ./run.sh make serve

This command will print a set of logs including a log like nanobot::serve: listening on 0.0.0.0:3000. This means your web editor is ready, and you can start editing your data.

You can start browsing web taxonomy editor from: http://localhost:3000/table

For further details see Taxonomy Development Tools Documentation