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Computational Modeling of Cellular Structures Using Conditional Deep Generative Networks

This is the tensorflow implementation of our recent work, "Computational Modeling of Cellular Structures Using Conditional Deep Generative Networks". The paper is currently under review and not released yet. We have released our experimental results, please check the results folder.

How to run it

  1. Clone or download this repository to your working directory.
  2. Get the datasets ready. Please check data folder for detail.
  3. Set related arguments in main.py. There are three proposed skip connections, please choose the corresponding ops-XXX file and update the name to 'ops.py'.
  4. Call python main.py or ย python main.py --action=train to train the model.
  5. If you wish to use "parzen window" to evaluate the model, set a checkpoint in arguments for the model to reload and then call python main.py --action=test.

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cgan's Issues

Problem with encode_img() function in aee.py

Hi, I'm trying to get your code to work but I get an error for an undefined name at line 63 in the aee.py file, more specifically the following line:
self.output_r, self.down_outputs = encode_img(self.input_x_r, self.conf.hidden_size)

It appears the encode_img() function is not defined.

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