Notebooks and Python scripts are in the src/scripts/ directory, while the figures themselves are in the src/figures/ directory.

To recreate the required environment for running Python code, follow these steps. (Skip the first two steps if you have Jupyter with nb_conda_kernels installed already.)

1. Install conda or mamba, e.g. using miniforge.
2. Install necessary packages to the base environment. Make sure you are installing them from the conda-forge channel.

mamba install -c conda-forge jupyterlab nb_conda_kernels

3. Git-clone or download this repository to your computer.
4. In the command line, navigate to the downloaded folder, e.g.

cd /path/to/downloaded/repository

5. Create a separate conda environment.

mamba env create --file environment.yml

1. Start the Jupyter Lab, for example from the command line (from the base environment).

jupyter lab

2. Open notebooks within the lfric_ana environment start running the code.

TODO