Creates a docker image with stacks2 and the necessary tools to install it. it also contains the wrapper script parameter_optimization.py which runs stacks2 multiple times with different parameters then output the parameter set that generates the highest R80 loci (loci retained after filtering for at most 20% missingness).
dennislarsson / stacks2-image Goto Github PK
View Code? Open in Web Editor NEWCreates a docker image with stacks2 and necessary tools installed