Code Monkey home page Code Monkey logo

dcmjs's Introduction

dcmjs

JavaScript implementation of DICOM manipulation. This code is an outgrowth of several efforts to implement web applications for medical imaging.


CI

Note: this code is a work-in-progress and should not be used for production or clinical purposes

This is a community effort so please help improve support for a wide range of DICOM data and use cases.

See live examples here

Goals

Overall the code should:

  • Support reading and writing of correct DICOM objects in JavaScript for browser or node environments
  • Provide a programmer-friendly JavaScript environment for using and manipulating DICOM objects
  • Include a set of useful demos to encourage correct usage of dcmjs and modern DICOM objects
  • Encourage correct referencing of instances and composite context when creating derived objects
  • Current target is modern web browsers, but a set of node-based utilities also makes sense someday

Architectural goals include:

  • Use modern JavaScript programming methods (currently ES6) but avoid heavy frameworks
  • Leverage modern DICOM standards but avoid legacy parts
  • Support straightforward integration with multiple JavaScript deployment targets (browser, node, etc) and frameworks.

Parts of DICOM that dcmjs will focus on:

  • Enhanced Multiframe Images
  • Segmentation Objects
  • Parametric Maps
  • Structured Reports

Parts of DICOM that dcmjs will not focus on:

  • DIMSE (legacy networking like C-STORE, C-FIND, C-MOVE, etc). See the dcmjs-dimse project for that.
  • Physical Media (optical disks). See this FAQ if you need to work with those.
  • Image rendering. See dcmjs-imaging for this.
  • 3D rendering. See vtk.js.
  • Radiology review application - see OHIF.

Usage

In Browser

<script type="text/javascript" src="https://unpkg.com/dcmjs"></script>

In Node

// To install latest _stable_ release
npm install --save dcmjs

// To install latest code merged to master
npm install --save dcmjs@dev

For Developers

git clone https://github.com/dcmjs-org/dcmjs
cd dcmjs
npm install
npm run build
npm test

For Maintainers and Contributors

Publish new version automatically from commit:

Use the following "Commit Message Format" when drafting commit messages. If you're merging a 3rd party's PR, you have the ability to override the supplied commit messages by doing a "Squash & Merge":

Note: Be wary of BREAKING_CHANGE in commit message descriptions, as this can force a major version bump.

Be sure to use lower case for the first letter of your semantic commit message, so use fix not Fix or feat not Feat, have a space after the : and make the PR github review title follow the SAME rules. It is the PR review title that determins the final commit message and will be used for semantic detection.

Note: a new package version will be published only if the commit comes from a PR.

Optional Tooling

It is advised to use the git-cz, i.e.:

  • install git-cz
npm install -g git-cz
  • how to commit
git-cz --non-interactive --type=fix --subject="commit message"

More info at git-cz.

Community Participation

Use this repository's issues page to report any bugs. Please follow SSCCE guidelines when submitting issues.

Use github pull requests to make contributions.

Unit Tests

Tests are written using the Jest testing framework and live in the test/ folder. Test file names must end with .test.js.

Pull requests should either update existing tests or add new tests in order to ensure good test coverage of the changes being made.

To run all tests use npm run test. To only run specific tests use Jest's .only feature. If you're using VS Code, an extension such as firsttris.vscode-jest-runner can be used to step through specific tests in the debugger.

Read all about unit testing best practices here.

Status

Currently dcmjs is an early-stage development experiment, but already has valuable functionality.

Implemented

  • Bidirectional conversion to and from part 10 binary DICOM and DICOM standard JSON encoding (as in DICOMweb)
  • Bidirectional convertion to and from DICOM standard JSON and a programmer-friendly high-level version (high-level form is called the "naturalized" form in the code).

In development

  • Creation of (correct) enhanced multiframe DICOM objects from legacy image objects
  • Creation of (correct) derived DICOM objects such as Segmentations and Structured Reports

TODO

  • Create a test suite of input and output DICOM objects
  • Test interoperability with other DICOM implementations
  • Add documentation

History

Support

The developers gratefully acknowledge their research support:

Recommend Projects

  • React photo React

    A declarative, efficient, and flexible JavaScript library for building user interfaces.

  • Vue.js photo Vue.js

    🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.

  • Typescript photo Typescript

    TypeScript is a superset of JavaScript that compiles to clean JavaScript output.

  • TensorFlow photo TensorFlow

    An Open Source Machine Learning Framework for Everyone

  • Django photo Django

    The Web framework for perfectionists with deadlines.

  • D3 photo D3

    Bring data to life with SVG, Canvas and HTML. 📊📈🎉

Recommend Topics

  • javascript

    JavaScript (JS) is a lightweight interpreted programming language with first-class functions.

  • web

    Some thing interesting about web. New door for the world.

  • server

    A server is a program made to process requests and deliver data to clients.

  • Machine learning

    Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.

  • Game

    Some thing interesting about game, make everyone happy.

Recommend Org

  • Facebook photo Facebook

    We are working to build community through open source technology. NB: members must have two-factor auth.

  • Microsoft photo Microsoft

    Open source projects and samples from Microsoft.

  • Google photo Google

    Google ❤️ Open Source for everyone.

  • D3 photo D3

    Data-Driven Documents codes.