Daren Card's Projects
Modified version of Barry Clark's Jekyll Now website theme for use in Software Carpentry workshop
Badges for your personal developer branding, profile, and projects.
Museum Genomics Community Webpage
Various scripts and tools for next-generation sequencing analysis.
Informatically assessing natural history museum growth and activity
scripts for analyzing parthenogenesis data
Various useful scripts for phylogenetic analyses.
repository of public learning resources
Lesson on data analysis and visualization in Python for genomics
Automatically exported from code.google.com/p/rad-seq-primate
Pipeline for performing in-silico RADseq experiments
Daren's RADseq pipeline. Currently in development.
Python scripts for parsing/analyses of RAD-seq data
Python package for scraping recipes data
Data accompanying Card et al. Genome evolution and the future of phylogenomics of non-avian reptiles.
Resume template in R/RMarkdown LaTeX offering style(Friggeri)-content(yaml) separation
Harvard FAS informatics scRNAseq workshop website
Software Carpentry introduction to the shell for novices.
A suite of simple bioinformatic & data management tools for various purposes.
materials from SWC workshop, Feb. 2017
Genomic and annotation data for Solenodon paradoxus solPar1 genome
Big-genome modification to sparseMEM from Khan et al.
Software Carpentry workshop scripts and data analysis.
An application to remove PCR duplicates from high throughput sequencing runs.
instructor notes from Software Carpentry workshops
Using the TACC launcher to run bioinformatic pipelines
Create quizzes in QTI format for Canvas from Markdown-based plain text
Instructor training preparation, September 2015