croeder / clojure_craft Goto Github PK

[("organism")] nil nil
[("organism") ("organism")]
[("organism")] nil [
("organism")]
[("GO:0007568")] nil
[("CHEBI:27594") ("PR:000009758" "Entrez Gene sequ|mber 1, :part-of-speech "JJ", :text "Little", :start 102, :end 108, :dependency {:sentence-num 4, :token-num 1, :literal "Little", :normalized "little", :pos
ence") ("independent_continuant")]
[("organism") ("PR:000016877" "Entrez Gene sequence") ("CHEBI:26130")] nil
[("organism")]
[("GO:0065007")] [("organism") (|"JJ", :dep-id 2, :dep-type "SBJ"}, :anno-list nil} #clojure_craft.craft_pos.Token{:token-number 2, :part-of-speech "VBZ", :text "is", :start 109, :end 111, :d
"organism") ("species")]

SLSIA, I added one, but it would be nice for the code to be able to deal with this?

the ids usually include the ontology, but when we're not scraping the id values properly, it would be helpful to know what ontology we think we're working with