Tutorials and scripts for analyzing electrophysiological (LFP and spike train) data.

The tutorials folder contains jupyter notebooks meant to introduce common analyses of ephys data, emphasizing analyses frequently used by our lab, including:

• 0_LFP_Identifying_Oscillations: Quantify LFP oscillations in the time and frequency domains
• 1_LFP_Coherence_Directionality: Between LFP signal analyses
• 2_ST_LFP_Spike_LFP_Coupling: Quantify how spike timing relates to LFP oscillations
• 3_ST_SpikeTrain_Analyses: Introduction to spike train analyses
• 4_ST_Spike_Synchrony: Methods to quantify neural synchronization

Scripts for analyzing LFP / spike data collected from electrode array recordings of brain slices, with stimulus information contained in ceed files.

Case Studies in Neural Data Analysis (Mark Kramer, Uri Eden, Emily Schlafly): Many tutorials on basic neural data analysis in python voytekresearch/tutorials: Tutorials from the Voytek lab on ephys data analysis