ANOVA analysis on the connectivity values extracted from significant clusters from the JAACAP paper (Gabbay, V., Ely, B. A., Li, Q., Bangaru, S. D., Panzer, A. M., Alonso, C. M., Castellanos, F. X., & Milham, M. P. (2013). Striatum-based circuitry of adolescent depression and anhedonia. Journal of the American Academy of Child and Adolescent Psychiatry, 52(6), 628–41.e13. DOI:10.1016/j.jaac.2013.04.003)

The code is published to facilitate the repeatable and reproducible research.

• *.csv: data files
• anova_vilma.Rmd: The code and report combined in a Rmd file.
• anova_vilma.md: out put of the Rmd in md format. md is markdown.
• anova_vilma.html: the result file in html format. this file is also published on rpub.com (https://rpubs.com/conge/GABA_ANOVA_Vilam)

Use RStudio IDE to knit the Rmd file to repeat the analysis.

• Note: you might want to change the path to the data files.