conda-forge / r-haven-feedstock Goto Github PK
View Code? Open in Web Editor NEWA conda-smithy repository for r-haven.
License: BSD 3-Clause "New" or "Revised" License
A conda-smithy repository for r-haven.
License: BSD 3-Clause "New" or "Revised" License
Issue:
The r-haven
package seems to install a package that is not linked to libiconv:
> library(haven)
Error: package or namespace load failed for ‘haven’ in dyn.load(file, DLLpath = DLLpath, ...):
unable to load shared object '/home/pvh/anaconda3/envs/tidyverse_test/lib/R/library/haven/libs/haven.so':
/home/pvh/anaconda3/envs/tidyverse_test/lib/R/library/haven/libs/haven.so: undefined symbol: libiconv
This looks similar to the problem reported here.
Environment (conda list
):
$ conda list
# packages in environment at /home/pvh/anaconda3/envs/tidyverse_test:
#
# Name Version Build Channel
_libgcc_mutex 0.1 main
_r-mutex 1.0.1 anacondar_1 conda-forge
binutils_impl_linux-64 2.31.1 h6176602_1
binutils_linux-64 2.31.1 h6176602_8
bwidget 1.9.11 0 conda-forge
bzip2 1.0.8 h516909a_1 conda-forge
ca-certificates 2019.9.11 hecc5488_0 conda-forge
cairo 1.14.12 h8948797_3
curl 7.65.3 hf8cf82a_0 conda-forge
cyrus-sasl 2.1.27 he38ecfd_0 conda-forge
dbus 1.13.2 h714fa37_1
expat 2.2.5 he1b5a44_1003 conda-forge
font-ttf-dejavu-sans-mono 2.37 hab24e00_0 conda-forge
font-ttf-inconsolata 2.001 hab24e00_0 conda-forge
font-ttf-source-code-pro 2.030 hab24e00_0 conda-forge
font-ttf-ubuntu 0.83 hab24e00_0 conda-forge
fontconfig 2.13.0 h9420a91_0
fonts-anaconda 1 h8fa9717_0
freetype 2.10.0 he983fc9_1 conda-forge
fribidi 1.0.5 h516909a_1002 conda-forge
gcc_impl_linux-64 7.3.0 habb00fd_1 conda-forge
gcc_linux-64 7.3.0 h553295d_8 conda-forge
gettext 0.19.8.1 hc5be6a0_1002 conda-forge
gfortran_impl_linux-64 7.3.0 hdf63c60_1
gfortran_linux-64 7.3.0 h553295d_8
glib 2.56.2 had28632_1001 conda-forge
graphite2 1.3.13 hf484d3e_1000 conda-forge
gsl 2.4 h294904e_1006 conda-forge
gst-plugins-base 1.14.0 hbbd80ab_1
gstreamer 1.14.0 hb453b48_1
gxx_impl_linux-64 7.3.0 hdf63c60_1 conda-forge
gxx_linux-64 7.3.0 h553295d_8 conda-forge
harfbuzz 1.9.0 he243708_1001 conda-forge
icu 58.2 hf484d3e_1000 conda-forge
jpeg 9c h14c3975_1001 conda-forge
krb5 1.16.3 h05b26f9_1001 conda-forge
libblas 3.8.0 12_openblas conda-forge
libcblas 3.8.0 12_openblas conda-forge
libcurl 7.65.3 hda55be3_0 conda-forge
libedit 3.1.20170329 hf8c457e_1001 conda-forge
libffi 3.2.1 he1b5a44_1006 conda-forge
libgcc-ng 9.1.0 hdf63c60_0
libgfortran-ng 7.3.0 hdf63c60_0
libiconv 1.15 h516909a_1005 conda-forge
libntlm 1.4 h14c3975_1002 conda-forge
libopenblas 0.3.7 h6e990d7_1 conda-forge
libpng 1.6.37 hed695b0_0 conda-forge
libssh2 1.8.2 h22169c7_2 conda-forge
libstdcxx-ng 9.1.0 hdf63c60_0
libtiff 4.0.10 h57b8799_1003 conda-forge
libuuid 1.0.3 h1bed415_2
libxcb 1.13 h14c3975_1002 conda-forge
libxml2 2.9.9 h13577e0_2 conda-forge
lz4-c 1.8.3 he1b5a44_1001 conda-forge
make 4.2.1 h14c3975_2004 conda-forge
ncurses 6.1 hf484d3e_1002 conda-forge
openjdk 8.0.192 h14c3975_1003 conda-forge
openssl 1.1.1c h516909a_0 conda-forge
pandoc 2.7.3 0 conda-forge
pango 1.42.4 h049681c_0
pcre 8.43 he6710b0_0
pixman 0.38.0 h516909a_1003 conda-forge
pthread-stubs 0.4 h14c3975_1001 conda-forge
qt 5.6.3 h8bf5577_3
r-askpass 1.1 r36hcdcec82_1 conda-forge
r-assertthat 0.2.1 r36h6115d3f_1 conda-forge
r-backports 1.1.4 r36hcdcec82_1 conda-forge
r-base 3.6.1 hce969dd_0
r-base64enc 0.1_3 r36hcdcec82_1003 conda-forge
r-bit 1.1_14 r36hcdcec82_1 conda-forge
r-bit64 0.9_7 r36hcdcec82_1001 conda-forge
r-bitops 1.0_6 r36hcdcec82_1003 conda-forge
r-blob 1.2.0 r36_1 conda-forge
r-broom 0.5.2 r36h6115d3f_1 conda-forge
r-callr 3.3.1 r36h6115d3f_0 conda-forge
r-catools 1.17.1.2 r36h0357c0b_1 conda-forge
r-cellranger 1.1.0 r36h6115d3f_1002 conda-forge
r-cli 1.1.0 r36h6115d3f_2 conda-forge
r-clipr 0.7.0 r36h6115d3f_0 conda-forge
r-colorspace 1.4_1 r36hcdcec82_1 conda-forge
r-config 0.3 r36h6115d3f_1002 conda-forge
r-crayon 1.3.4 r36h6115d3f_1002 conda-forge
r-curl 4.0 r36hcdcec82_0 conda-forge
r-dbi 1.0.0 r36h6115d3f_1002 conda-forge
r-dbplyr 1.4.2 r36h6115d3f_1 conda-forge
r-digest 0.6.20 r36h0357c0b_1 conda-forge
r-dplyr 0.8.3 r36h0357c0b_3 conda-forge
r-ellipsis 0.2.0.1 r36hcdcec82_1 conda-forge
r-evaluate 0.14 r36h6115d3f_1 conda-forge
r-fansi 0.4.0 r36hcdcec82_1001 conda-forge
r-forcats 0.4.0 r36h6115d3f_1 conda-forge
r-forge 0.2.0 r36h6115d3f_1 conda-forge
r-fs 1.3.1 r36h0357c0b_1 conda-forge
r-generics 0.0.2 r36h6115d3f_1002 conda-forge
r-ggplot2 3.2.1 r36h6115d3f_0 conda-forge
r-glue 1.3.1 r36hcdcec82_1 conda-forge
r-gtable 0.3.0 r36h6115d3f_2 conda-forge
r-haven 2.1.1 r36h0357c0b_1 conda-forge
r-highr 0.8 r36h6115d3f_1 conda-forge
r-hms 0.5.1 r36h6115d3f_0 conda-forge
r-htmltools 0.3.6 r36he1b5a44_1003 conda-forge
r-htmlwidgets 1.3 r36h6115d3f_1001 conda-forge
r-httpuv 1.5.2 r36h0357c0b_1 conda-forge
r-httr 1.4.1 r36h6115d3f_1 conda-forge
r-jsonlite 1.6 r36hcdcec82_1001 conda-forge
r-knitr 1.24 r36h6115d3f_0 conda-forge
r-labeling 0.3 r36h6115d3f_1002 conda-forge
r-later 0.8.0 r36h0357c0b_2 conda-forge
r-lattice 0.20_38 r36hcdcec82_1002 conda-forge
r-lazyeval 0.2.2 r36hcdcec82_1 conda-forge
r-lubridate 1.7.4 r36h0357c0b_1002 conda-forge
r-magrittr 1.5 r36h6115d3f_1002 conda-forge
r-markdown 1.1 r36hcdcec82_0 conda-forge
r-mass 7.3_51.4 r36hcdcec82_1 conda-forge
r-matrix 1.2_17 r36hcdcec82_1 conda-forge
r-mgcv 1.8_28 r36hcdcec82_1 conda-forge
r-mime 0.7 r36hcdcec82_1 conda-forge
r-miniui 0.1.1.1 r36h6115d3f_1001 conda-forge
r-modelr 0.1.5 r36h6115d3f_0 conda-forge
r-mongolite 2.1.0 r36hcdcec82_1 conda-forge
r-munsell 0.5.0 r36h6115d3f_1002 conda-forge
r-nlme 3.1_141 r36h9bbef5b_1 conda-forge
r-odbc 1.1.6 r36h0357c0b_2 conda-forge
r-openssl 1.4.1 r36h9c8475f_0 conda-forge
r-packrat 0.5.0 r36h6115d3f_1001 conda-forge
r-pillar 1.4.2 r36h6115d3f_2 conda-forge
r-pkgconfig 2.0.2 r36h6115d3f_1003 conda-forge
r-pki 0.1_5.1 r36hcdcec82_1003 conda-forge
r-plogr 0.2.0 r36h6115d3f_1002 conda-forge
r-plyr 1.8.4 r36h0357c0b_1003 conda-forge
r-prettyunits 1.0.2 r36h6115d3f_1002 conda-forge
r-processx 3.4.1 r36hcdcec82_0 conda-forge
r-profvis 0.3.6 r36hcdcec82_1 conda-forge
r-progress 1.2.2 r36h6115d3f_1 conda-forge
r-promises 1.0.1 r36h0357c0b_1001 conda-forge
r-ps 1.3.0 r36hcdcec82_1001 conda-forge
r-purrr 0.3.2 r36hcdcec82_1 conda-forge
r-r2d3 0.2.3 r36h6115d3f_1001 conda-forge
r-r6 2.4.0 r36h6115d3f_2 conda-forge
r-rappdirs 0.3.1 r36hcdcec82_1003 conda-forge
r-rcolorbrewer 1.1_2 r36h6115d3f_1002 conda-forge
r-rcpp 1.0.2 r36h0357c0b_0 conda-forge
r-rcurl 1.95_4.12 r36hcdcec82_1 conda-forge
r-readr 1.3.1 r36h0357c0b_1002 conda-forge
r-readxl 1.3.1 r36h0357c0b_1 conda-forge
r-rematch 1.0.1 r36h6115d3f_1002 conda-forge
r-reprex 0.3.0 r36h6115d3f_1 conda-forge
r-reshape2 1.4.3 r36h0357c0b_1004 conda-forge
r-rjava 0.9_11 r36hcdcec82_1 conda-forge
r-rjdbc 0.2_7.1 r36h6115d3f_0
r-rjsonio 1.3_1.2 r36h0357c0b_1 conda-forge
r-rlang 0.4.0 r36hcdcec82_1 conda-forge
r-rmarkdown 1.15 r36h6115d3f_0 conda-forge
r-rprojroot 1.3_2 r36h6115d3f_1002 conda-forge
r-rsconnect 0.8.15 r36h6115d3f_0 conda-forge
r-rstudioapi 0.10 r36h6115d3f_2 conda-forge
r-rvest 0.3.4 r36h6115d3f_1 conda-forge
r-scales 1.0.0 r36h0357c0b_1002 conda-forge
r-selectr 0.4_1 r36h6115d3f_1001 conda-forge
r-shiny 1.3.2 r36h6115d3f_1 conda-forge
r-sourcetools 0.1.7 r36he1b5a44_1001 conda-forge
r-sparklyr 1.0.2 r36h6115d3f_1 conda-forge
r-stringi 1.4.3 r36h0357c0b_2 conda-forge
r-stringr 1.4.0 r36h6115d3f_1 conda-forge
r-sys 3.3 r36hcdcec82_0 conda-forge
r-tibble 2.1.3 r36hcdcec82_1 conda-forge
r-tidyr 0.8.3 r36h0357c0b_1 conda-forge
r-tidyselect 0.2.5 r36h0357c0b_1001 conda-forge
r-tidyverse 1.2.1 r36h6115d3f_1002 conda-forge
r-tinytex 0.15 r36h6115d3f_0 conda-forge
r-utf8 1.1.4 r36hcdcec82_1001 conda-forge
r-vctrs 0.2.0 r36hcdcec82_1 conda-forge
r-viridislite 0.3.0 r36h6115d3f_1002 conda-forge
r-whisker 0.4 r36h6115d3f_0 conda-forge
r-withr 2.1.2 r36h6115d3f_1001 conda-forge
r-xfun 0.9 r36h6115d3f_0 conda-forge
r-xml2 1.2.2 r36h0357c0b_0 conda-forge
r-xtable 1.8_4 r36h6115d3f_2 conda-forge
r-yaml 2.2.0 r36hcdcec82_1002 conda-forge
r-zeallot 0.1.0 r36h6115d3f_1001 conda-forge
readline 7.0 hf8c457e_1001 conda-forge
rstudio 1.1.456 h6bb024c_1
sqlite 3.28.0 h8b20d00_0 conda-forge
tk 8.6.9 hed695b0_1003 conda-forge
tktable 2.10 h555a92e_2 conda-forge
unixodbc 2.3.7 h227dcee_1000 conda-forge
xorg-libxau 1.0.9 h14c3975_0 conda-forge
xorg-libxdmcp 1.1.3 h516909a_0 conda-forge
xz 5.2.4 h14c3975_1001 conda-forge
zlib 1.2.11 h516909a_1006 conda-forge
zstd 1.4.0 h3b9ef0a_0 conda-forge
conda
and system ( conda info
):
$ conda info
active environment : tidyverse_test
active env location : /home/pvh/anaconda3/envs/tidyverse_test
shell level : 2
user config file : /home/pvh/.condarc
populated config files : /home/pvh/.condarc
conda version : 4.7.11
conda-build version : 3.18.8
python version : 3.7.3.final.0
virtual packages :
base environment : /home/pvh/anaconda3 (writable)
channel URLs : https://conda.anaconda.org/conda-forge/linux-64
https://conda.anaconda.org/conda-forge/noarch
https://conda.anaconda.org/bioconda/linux-64
https://conda.anaconda.org/bioconda/noarch
https://repo.anaconda.com/pkgs/main/linux-64
https://repo.anaconda.com/pkgs/main/noarch
https://repo.anaconda.com/pkgs/r/linux-64
https://repo.anaconda.com/pkgs/r/noarch
package cache : /home/pvh/anaconda3/pkgs
/home/pvh/.conda/pkgs
envs directories : /home/pvh/anaconda3/envs
/home/pvh/.conda/envs
platform : linux-64
user-agent : conda/4.7.11 requests/2.22.0 CPython/3.7.3 Linux/5.0.0-27-generic ubuntu/19.04 glibc/2.29
UID:GID : 1000:1000
netrc file : None
offline mode : False
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