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View Code? Open in Web Editor NEWLDpred2 Docker setup for FinnGen
License: MIT License
LDpred2 Docker setup for FinnGen
License: MIT License
The chromosome files introduce a bunch of File
arguments. This ought to be simplified.
ldpred2-pipeline/wdl/run_ldpred2.wdl
Line 19 in be08a38
Update LDpred2 scripts from the current version (https://github.com/comorment/containers/releases/tag/v1.3.1)
Add workflow on top of the others, see https://cromwell.readthedocs.io/en/stable/SubWorkflows/.
Set up input/output files according to one of the examples from the LDpred2 README.
Make sure that it can run using a freestanding Cromwell installation.
with changes from comorment/containers#183
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