cidarlab / fpselection Goto Github PK

Should be in this format:

FP; Laser; Detector

Remove all options for algorithms and make the default algorithm: Simulated Annealing.

Each Fluorophore, Laser, Filter should have its own plot.

Have the following input fields:

Cytometer Settings - Required

Fluorophore Spectra List - Required

Brightness - Required

Autofluoresence - Optional

N - Required

Plots Info should have the following format:
FP ; Laser ; Filter ; Signal ; Bleedthrough

To more accurately portray bleedthrough information I updated the method in ProteinSelector that generates the noise treemap. I noticed there was a lot of references to a noiseKey in DataAnalytics, so you should double check those calculations if you need to.

Bleedthrough for a given FP & Detector is now represented as the sum of expressions of all other FPs using the given FP's selected laser. (Before it was of all FPs intended to be used with other lasers, not all other FPs)

Order the images in the following manner:
Prashant - Evan
David - Alex

Advisors: (Add a small text field that says Advisors:)

Doug