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machinelearning

机器学习有关算法和实例

mag_snakemake_wf

Recovery of prokaryotic genomes from shotgun metagenomic sequencing data

mariculture-sediment-virome

metawrap

MetaWRAP - a flexible pipeline for genome-resolved metagenomic data analysis

mgefinder

A toolbox for identifying mobile genetic element (MGE) insertions from short-read sequencing data of bacterial isolates.

mgv_catalog

Supporting code for uncultivated gut virus manuscript

microbiome_helper

A repository of bioinformatic scripts, SOPs, and tutorials for analyzing microbiome data.

mismatch_crispri

Code for designing libraries of mismatch-modulated guide-RNAs for CRISPRi, and analyzing pooled-growth sample pairs generated using those libraries. Intended for use with: traeki/sgrna_design

pipeline-v5

This repository contains all CWL descriptions of the MGnify pipeline version 5.0.

pydata-book

Materials and IPython notebooks for "Python for Data Analysis" by Wes McKinney, published by O'Reilly Media

python

All Algorithms implemented in Python

python-100-days

Python - 100天从新手到大师

r

reference-frames

rumen_virome

scripts

sheng-xin-xiao-bai-yu

历史文档备份

sjtu-courses

上海交通大学课程资料分享

snv_analysis_almeida2019

spatiotemporalviromes

tensorflow

An Open Source Machine Learning Framework for Everyone

tensorflow-examples

TensorFlow Tutorial and Examples for Beginners (support TF v1 & v2)

the-craft-of-selfteaching

One has no future if one couldn't teach themself.

tools-microbiome-analysis

A list of R environment based tools for microbiome data exploration, statistical analysis and visualization

ustc-course

:heart:**科学技术大学课程资源

viralclust

Small pipeline to cluster viral genomes based on their k-mer content. WiP

virhostmatcher

VirHostMatcher: matching hosts of viruses based on oligonucleotide frequency (ONF) comparison

zju-icicles

浙江大学课程攻略共享计划