Comments (24)
Should be!
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Thanks Chris. I just found and fixed an error in all.bib (my bad) -- fetch from me to make the refs work.
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I'm working on it. It's going to take a long time to debug this as the build process takes so long
from csas-latex.
There was a quote mark that was somehow deleted in the figures section so I've fixed that but there is another error in the introduction.
Anytime I write latex sections, I always comment out all the other sections in res-doc.rnw so that I can test it more quickly.
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Nice. I'll give it a shot. Are the citations coming in too?
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no citations coming in :(
and I just deleted my comment because I've got M-sensitivities but not q-prior ones - but enough to keep working on the text!
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It appears that we can't use \cite{} in Miktex but you can on the mac. So I've changed all of them to \citet{} and am building now. There was a bunch of them in the introduction.
Hopefully that was all. Then I'll get back to doing the q sensitivity plots
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Did you source "ResearchDocumentV2.R" after copying the q-prior sensitivities, to put the *.csv's in the /mcmc? Then build()
.
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I did, yes
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Oops, I meant Jaclyn.
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@cgrandin
I just merged with you- what was the error in the intro I was making, so that I don't make it again?
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Use \citet instead of \cite
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But I haven't pushed the changes yet, and it's still breaking somewhere else
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ok
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Ok, it's all fixed in commit f5a0ca2.
I guess we can't have the >% operator inside an \Sexpr{}. That also broke it.
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Ah, dang it -- did I mess it up?
I fetched and merged, and then fixed some merge conflicts in the intro. Now I get this error when I try to compile:
Error in readLines(if (is.character(input2)) { :
I ran delete.rdata.files()
and build()
but I still get the same error.
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I was getting this error before I merged with you...I think?
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Do you have it working now Matt?
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Took me a while to get up to date and fix the merge conflicts. I think we're all working on the same sections. No, still the same error.
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Although last night I was able to build the pdf, I can't now.
When I run, library(knitr);knit('./res-doc.rnw') I get:
Quitting from lines 113-113 (./maindoc/test.rnw)
Error in readLines(if (is.character(input2)) { :
cannot open the connection
In addition: Warning message:
In readLines(if (is.character(input2)) { :
cannot open file './maindoc/test.rnw': No such file or directory
And when I compile PDF from res-doc.rnw, I get:
Line 113: Error in readLines(if (is.character(input2)) { :
(this is all after running fresh.sh)
from csas-latex.
What is maindoc/test.rnw? I don't have that file either.
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test.rnw is a file I have locally, I use it to put plot or table code in, then I comment out every other section so that it builds really quick. It's just a way of making sure I haven't broken anything before I put the code in the document. It should have been commented out when I committed but if it wasn't my apologies.
I'm trying again now, and will debug again. So far today has been basically a debug session. I'm staying later today also.
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There were more /cite{} commands in the intro that I had to change to /citet{} again. The doc builds for me on commit 911bd78
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so if I fetch from you I should be good?
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Related Issues (20)
- Matt, I can't fetch your commits in the Herring repo HOT 12
- Herring SAR HOT 9
- Table 2. edits HOT 4
- Tables 13 to 17 have incorrect values for SB_2018 HOT 7
- edit to AM1 decision tables HOT 3
- edits to decision tables - catch stream HOT 22
- Automate catch stream for decision tables
- Figure caption for Figure 20 HOT 1
- Odd SB_2018 for CC AM2 with new data/code HOT 12
- Likelihoods HOT 1
- I added the first two pages but.. HOT 4
- How/where do I rename columns (i.e., decision tables)? HOT 5
- Links are all underlined HOT 1
- Develop alternative decision tables where we specify p(avoiding LRP)
- Go ahead and merge the csas-style repo
- How to edit the 'Reference points' table header? HOT 1
- Remove redundant rows from Table 2 HOT 2
- Include ageing error in assessment model?
- Trouble with using 'assess.yr' for documents that span multiple calendar years HOT 1
- Update 'spawn index' figure for minor stock areas
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