This repository contains the R code used to analyze neutrophils.
The data
folder contains two files
tracks.csv
contains tracked neutrophils where each row is one neutrophil. Each column is either a Metadata or a migraiton feature.normalized.csv
contains the normalized migration data. It an be generated using the R notebookR/02_normalize.Rmd
The folder R
contains threee R notebooks used to assess the tracking results, normalize them and to export summaries as csv / xslx files
The results
folder contains the data generated by the notebook R/03_export.Rmd