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Hello!

After several attempts trying to create my reference with Pan-cancer T cell infiltrated data, I found out that you already created it (for CD8 data). I was having errors because there was no integration slot when I loaded the Seurat object...

Well, now I'm trying to reproduce your method to generate the CD4 TIL atlas. But there is not the repertory mentioned in the tutorial:
https://github.com/carmonalab/human_TIL_atlas

Could you please post how to create the Human_CD8_TILs_atlas.rds (or in my case, with the CD4 data)

Thank you in advance, and thank you for such an amazing and well documented software!!