These demos were written in March 2018 for an informal presentation about the ETE3 Toolkit, a great Python package for phylogenetic tree visualization. They are Jupyter notebooks written for Python 3. They are largely based on the tutorial provided on the ETE3 web site, but updated for Python3 and notebooks and in some places modified for the things that I wanted to focus on.

I suggest starting with the ETE3.demo.ipynb, which covers the basics of trees. The ETE3.drawing.demo.ipynb gets into tree drawing.

It would be great if others want to add to these notebooks. I have found that the documentation for ETE3 can be a bit hard to follow or outdated at times, so any additional comments, notes, demos, etc. would make this great toolkit more readily available to a wider audience.