c3bi-pasteur-fr Goto Github PK

beadarraycnv

beamertheme

bioweb

blast2seqids

parse a blast output in ( text format -m 0 ) and return a list of hits identifier in usa format.

cassandre

Personal database system integrating a "user-friendly" interface to manage and explore multiple sets of large-scale experimental results.

common-workflow-language

Repository for CWL Specfications

coregenebuilder

CoreGeneBuilder can be used to extract a core genome or a persistent genome from a given set of bacterial genomes

cpdist

craw

Counter RNA seq Window (CRAW) compute and visualize the coverage of RNA seq experiment.

cwltool

Common Workflow Language reference implementation

efasta

eFASTA: extracting nucleotide segments from FASTA file

fasta-rename

Parse a file with fasta sequences. Replace the identifier of a fasta sequences by a short identifier and generate a file with renamed fasta sequences and a file of mapping.

fastaextract

extract or exclude entries by name from fasta formatted files.

fragmentanalyser

galaxy

Data intensive science for everyone.

galaxy-dist

Galaxy Pasteur instance repository

galaxy-playbook

galaxy_base_conf

IPGalaxy basic configuration

galaxy_training_material

ifb-bioshadock

host Dockerfiles for Bioshadock

ifb-playbook

store playbook to build IFB appliances

igv-webapp

IGV Web App

ngphylogeny-django

ngphylogeny-galaxy

Galaxy tools and workflows used in NGPhylogeny.fr

python-course-1

python course of E2I2B

python-solutions-1

solutions of the E2I2B python courses exercises

regate

Registration of Galaxy Tools in Elixir

salmonella-crispr-typing

sandbox

sandbox for the git tutorial

schnappscontributions

some contributions to the scShinyHub project