burrsettles / dualist Goto Github PK

I followed the step in README file and installed Play!.
When I tried to use command "dualist gui" as in the instruction, it prompted me that "-bash: dualist: command not found". How can I fix this? Thanks!

What steps will reproduce the problem?
1. Open DUALIST in Exploration Mode
2. Select single lines (or tweets) data set (example attached)
3. Fill in class labels (in this case: "Pos, neg, neu"))  and press "Start 
Exploring!".

What is the expected output? What do you see instead?
Expected output is DUALIST GUI, instead see Play exception report (attached)

What version of the product are you using? On what operating system?
Lastest version of DUALIST OS X 10.7.2, Google Chrome

Please provide any additional information below.
I've tried this with two single lines datasets, one with instance numbers and a 
classification followed by the instance (separated by tabs) and the one 
attached, both result in the same error. 

Original issue reported on code.google.com by [email protected] on 11 Dec 2011 at 7:33

Attachments:

• dualisterror.png
• eliminations_annotated.mallet

$ dualist test models/a_three_class_model /path_to_3_class_test.zip
~
~ __ __ __ __
~ .--| |.--.--.---.-.| ||.-----.| |_
~ | _ || | | _ || | || --|| |
~ ||||**.|||||**||__|
~
~ Loading trained model...
|data|=199 |features|=7213 |labels|=4
Exception in thread "main" java.lang.ArrayIndexOutOfBoundsException: 3
at cc.mallet.types.Multinomial$Logged.addLogProbabilities(Multinomial.java:246)
at cc.mallet.classify.NaiveBayes.classify(NaiveBayes.java:153)
at cc.mallet.classify.Trial.(Trial.java:50)
at cc.mallet.classify.Classifier.getAccuracy(Classifier.java:148)
at dualist.tui.Test.main(Test.java:52)

What steps will reproduce the problem?
1. create series of textual lines, e.g.
NTR|the old man died suddenly.
NTR|Just a test.
NEG|boah, what utter bullocks!
NTR|maybe yes, maybe no.
POS|great!!
NTR|oh, I am surprised.
NTR|another test sentence to serve as training instance
NEG|bah, that totally sucks BIG TIME!!!

or (unlabeled)

the old man died suddenly.
Just a test.
boah, what utter bullocks!
maybe yes, maybe no.
great!!
oh, I am surprised.
another test sentence to serve as training instance
NEG|bah, that totally sucks BIG TIME!!!

2. launch Dualist, go to Web GUI
3. set parameters as shown in attached screen capture

What is the expected output? What do you see instead?

Execution exception
NullPointerException occured : null

In /app/controllers/Application.java (around line 101)

97:
         Cache.set(session.getId()+"-startTime", (System.currentTimeMillis()/1000), "90mn" );
98:

99:
         Cache.set(session.getId()+"-explore", true, "90mn");
100:

101:
         Logger.info("|featureSet|=%s", dataAlphabet.size());
102:
         Logger.info("|labelSet|=%s", labelAlphabet.size());
103:
         Logger.info("|dataSet|=%s", ilist.size());
104:
         Logger.info("User: %s", username);
105:

106:
         clearResult();
107:
         logResult("%% |featureSet|=" + dataAlphabet.size());
This exception has been logged with id 67nj9836a

What version of the product are you using? On what operating system?
Dualist 0.1 on MacOS 10.6.7.

Please provide any additional information below.

I also tried with various other separators ('#', '|', '||', ' ', '\t') - the 
result is unchanged. The error appears to be caused by an empty set of labels, 
but I've entered them using a comma as separator as suggested.

Original issue reported on code.google.com by [email protected] on 20 Sep 2011 at 12:33

Attachments:

• exploration.png

play.exceptions.UnexpectedException: Unexpected Error
at play.classloading.ApplicationCompiler$1.findType(ApplicationCompiler.java:195)
at play.classloading.ApplicationCompiler$1.findType(ApplicationCompiler.java:144)
at org.eclipse.jdt.internal.compiler.lookup.LookupEnvironment.askForType(LookupEnvironment.java:103)
at org.eclipse.jdt.internal.compiler.lookup.UnresolvedReferenceBinding.resolve(UnresolvedReferenceBinding.java:49)
at org.eclipse.jdt.internal.compiler.lookup.BinaryTypeBinding.resolveType(BinaryTypeBinding.java:122)
at org.eclipse.jdt.internal.compiler.lookup.LookupEnvironment.getTypeFromTypeSignature(LookupEnvironment.java:1237)
at org.eclipse.jdt.internal.compiler.lookup.LookupEnvironment.getTypeFromVariantTypeSignature(LookupEnvironment.java:1293)
at org.eclipse.jdt.internal.compiler.lookup.LookupEnvironment.getTypeArgumentsFromSignature(LookupEnvironment.java:1080)
at org.eclipse.jdt.internal.compiler.lookup.LookupEnvironment.getTypeFromTypeSignature(LookupEnvironment.java:1242)
at org.eclipse.jdt.internal.compiler.lookup.BinaryTypeBinding.createMethod(BinaryTypeBinding.java:509)
at org.eclipse.jdt.internal.compiler.lookup.BinaryTypeBinding.createMethods(BinaryTypeBinding.java:590)
at org.eclipse.jdt.internal.compiler.lookup.BinaryTypeBinding.cachePartsFrom(BinaryTypeBinding.java:329)
at org.eclipse.jdt.internal.compiler.lookup.LookupEnvironment.createBinaryTypeFrom(LookupEnvironment.java:674)
at org.eclipse.jdt.internal.compiler.lookup.LookupEnvironment.createBinaryTypeFrom(LookupEnvironment.java:653)
at org.eclipse.jdt.internal.compiler.Compiler.accept(Compiler.java:295)
at org.eclipse.jdt.internal.compiler.lookup.LookupEnvironment.askForType(LookupEnvironment.java:108)
at org.eclipse.jdt.internal.compiler.lookup.UnresolvedReferenceBinding.resolve(UnresolvedReferenceBinding.java:49)
at org.eclipse.jdt.internal.compiler.lookup.BinaryTypeBinding.resolveType(BinaryTypeBinding.java:122)
at org.eclipse.jdt.internal.compiler.lookup.ParameterizedTypeBinding.resolve(ParameterizedTypeBinding.java:851)
at org.eclipse.jdt.internal.compiler.lookup.BinaryTypeBinding.resolveType(BinaryTypeBinding.java:100)
at org.eclipse.jdt.internal.compiler.lookup.BinaryTypeBinding.resolveTypeFor(BinaryTypeBinding.java:1027)
at org.eclipse.jdt.internal.compiler.lookup.BinaryTypeBinding.getField(BinaryTypeBinding.java:829)
at org.eclipse.jdt.internal.compiler.lookup.Scope.findField(Scope.java:988)
at org.eclipse.jdt.internal.compiler.lookup.BlockScope.getBinding(BlockScope.java:472)
at org.eclipse.jdt.internal.compiler.ast.QualifiedNameReference.resolveType(QualifiedNameReference.java:905)
at org.eclipse.jdt.internal.compiler.ast.MessageSend.resolveType(MessageSend.java:316)
at org.eclipse.jdt.internal.compiler.ast.MessageSend.resolveType(MessageSend.java:316)
at org.eclipse.jdt.internal.compiler.ast.LocalDeclaration.resolve(LocalDeclaration.java:186)
at org.eclipse.jdt.internal.compiler.ast.Block.resolve(Block.java:90)
at org.eclipse.jdt.internal.compiler.ast.IfStatement.resolve(IfStatement.java:261)
at org.eclipse.jdt.internal.compiler.ast.Block.resolve(Block.java:90)
at org.eclipse.jdt.internal.compiler.ast.IfStatement.resolve(IfStatement.java:261)
at org.eclipse.jdt.internal.compiler.ast.AbstractMethodDeclaration.resolveStatements(AbstractMethodDeclaration.java:451)
at org.eclipse.jdt.internal.compiler.ast.MethodDeclaration.resolveStatements(MethodDeclaration.java:212)
at org.eclipse.jdt.internal.compiler.ast.AbstractMethodDeclaration.resolve(AbstractMethodDeclaration.java:410)
at org.eclipse.jdt.internal.compiler.ast.TypeDeclaration.resolve(TypeDeclaration.java:1147)
at org.eclipse.jdt.internal.compiler.ast.TypeDeclaration.resolve(TypeDeclaration.java:1235)
at org.eclipse.jdt.internal.compiler.ast.CompilationUnitDeclaration.resolve(CompilationUnitDeclaration.java:540)
at org.eclipse.jdt.internal.compiler.Compiler.process(Compiler.java:759)
at org.eclipse.jdt.internal.compiler.Compiler.compile(Compiler.java:464)
at play.classloading.ApplicationCompiler.compile(ApplicationCompiler.java:278)
at play.classloading.ApplicationClasses$ApplicationClass.compile(ApplicationClasses.java:258)
at play.classloading.ApplicationClassloader.loadApplicationClass(ApplicationClassloader.java:138)
at play.classloading.ApplicationClassloader.loadClass(ApplicationClassloader.java:75)
at java.lang.ClassLoader.loadClass(ClassLoader.java:357)
at play.Play.loadPlugins(Play.java:566)
at play.Play.init(Play.java:268)
at play.server.Server.main(Server.java:131)
Caused by: org.eclipse.jdt.internal.compiler.classfmt.ClassFormatException
at org.eclipse.jdt.internal.compiler.classfmt.ClassFileReader.(ClassFileReader.java:372)
at play.classloading.ApplicationCompiler$1.findType(ApplicationCompiler.java:163)
... 47 more
23:52:31,182 WARN ~ You're running Play! in DEV mode
23:52:31,358 INFO ~ Listening for HTTP on port 8080 (Waiting a first request to start) ...
23:53:07,900 ERROR ~

@75ichnloc
Internal Server Error (500) for request GET /

Oops: ClassFormatException
An unexpected error occured caused by exception ClassFormatException: null

play.exceptions.UnexpectedException: Unexpected Error
at play.classloading.ApplicationCompiler$1.findType(ApplicationCompiler.java:195)
at play.classloading.ApplicationCompiler$1.findType(ApplicationCompiler.java:144)
at org.eclipse.jdt.internal.compiler.lookup.LookupEnvironment.askForType(LookupEnvironment.java:103)
at org.eclipse.jdt.internal.compiler.lookup.UnresolvedReferenceBinding.resolve(UnresolvedReferenceBinding.java:49)
at org.eclipse.jdt.internal.compiler.lookup.BinaryTypeBinding.resolveType(BinaryTypeBinding.java:122)
at org.eclipse.jdt.internal.compiler.lookup.LookupEnvironment.getTypeFromTypeSignature(LookupEnvironment.java:1237)
at org.eclipse.jdt.internal.compiler.lookup.LookupEnvironment.getTypeFromVariantTypeSignature(LookupEnvironment.java:1293)
at org.eclipse.jdt.internal.compiler.lookup.LookupEnvironment.getTypeArgumentsFromSignature(LookupEnvironment.java:1080)
at org.eclipse.jdt.internal.compiler.lookup.LookupEnvironment.getTypeFromTypeSignature(LookupEnvironment.java:1242)
at org.eclipse.jdt.internal.compiler.lookup.BinaryTypeBinding.createMethod(BinaryTypeBinding.java:509)
at org.eclipse.jdt.internal.compiler.lookup.BinaryTypeBinding.createMethods(BinaryTypeBinding.java:590)
at org.eclipse.jdt.internal.compiler.lookup.BinaryTypeBinding.cachePartsFrom(BinaryTypeBinding.java:329)
at org.eclipse.jdt.internal.compiler.lookup.LookupEnvironment.createBinaryTypeFrom(LookupEnvironment.java:674)
at org.eclipse.jdt.internal.compiler.lookup.LookupEnvironment.createBinaryTypeFrom(LookupEnvironment.java:653)
at org.eclipse.jdt.internal.compiler.Compiler.accept(Compiler.java:295)
at org.eclipse.jdt.internal.compiler.lookup.LookupEnvironment.askForType(LookupEnvironment.java:108)
at org.eclipse.jdt.internal.compiler.lookup.UnresolvedReferenceBinding.resolve(UnresolvedReferenceBinding.java:49)
at org.eclipse.jdt.internal.compiler.lookup.BinaryTypeBinding.resolveType(BinaryTypeBinding.java:122)
at org.eclipse.jdt.internal.compiler.lookup.ParameterizedTypeBinding.resolve(ParameterizedTypeBinding.java:851)
at org.eclipse.jdt.internal.compiler.lookup.BinaryTypeBinding.resolveType(BinaryTypeBinding.java:100)
at org.eclipse.jdt.internal.compiler.lookup.BinaryTypeBinding.resolveTypeFor(BinaryTypeBinding.java:1027)
at org.eclipse.jdt.internal.compiler.lookup.BinaryTypeBinding.getField(BinaryTypeBinding.java:829)
at org.eclipse.jdt.internal.compiler.lookup.Scope.findField(Scope.java:988)
at org.eclipse.jdt.internal.compiler.lookup.BlockScope.getBinding(BlockScope.java:472)
at org.eclipse.jdt.internal.compiler.ast.QualifiedNameReference.resolveType(QualifiedNameReference.java:905)
at org.eclipse.jdt.internal.compiler.ast.MessageSend.resolveType(MessageSend.java:316)
at org.eclipse.jdt.internal.compiler.ast.MessageSend.resolveType(MessageSend.java:316)
at org.eclipse.jdt.internal.compiler.ast.LocalDeclaration.resolve(LocalDeclaration.java:186)
at org.eclipse.jdt.internal.compiler.ast.Block.resolve(Block.java:90)
at org.eclipse.jdt.internal.compiler.ast.IfStatement.resolve(IfStatement.java:261)
at org.eclipse.jdt.internal.compiler.ast.Block.resolve(Block.java:90)
at org.eclipse.jdt.internal.compiler.ast.IfStatement.resolve(IfStatement.java:261)
at org.eclipse.jdt.internal.compiler.ast.AbstractMethodDeclaration.resolveStatements(AbstractMethodDeclaration.java:451)
at org.eclipse.jdt.internal.compiler.ast.MethodDeclaration.resolveStatements(MethodDeclaration.java:212)
at org.eclipse.jdt.internal.compiler.ast.AbstractMethodDeclaration.resolve(AbstractMethodDeclaration.java:410)
at org.eclipse.jdt.internal.compiler.ast.TypeDeclaration.resolve(TypeDeclaration.java:1147)
at org.eclipse.jdt.internal.compiler.ast.TypeDeclaration.resolve(TypeDeclaration.java:1235)
at org.eclipse.jdt.internal.compiler.ast.CompilationUnitDeclaration.resolve(CompilationUnitDeclaration.java:540)
at org.eclipse.jdt.internal.compiler.Compiler.process(Compiler.java:759)
at org.eclipse.jdt.internal.compiler.Compiler.compile(Compiler.java:464)
at play.classloading.ApplicationCompiler.compile(ApplicationCompiler.java:278)
at play.classloading.ApplicationClasses$ApplicationClass.compile(ApplicationClasses.java:258)
at play.classloading.ApplicationClassloader.detectChanges(ApplicationClassloader.java:292)
at play.Play.detectChanges(Play.java:517)
at play.Invoker$Invocation.init(Invoker.java:100)
at Invocation.HTTP Request(Play!)
Caused by: org.eclipse.jdt.internal.compiler.classfmt.ClassFormatException
at org.eclipse.jdt.internal.compiler.classfmt.ClassFileReader.(ClassFileReader.java:372)
at play.classloading.ApplicationCompiler$1.findType(ApplicationCompiler.java:163)
... 45 more

What steps will reproduce the problem?
1. Open Exploration Mode with more than 10 categories
2. In the exploration page, there is no color for all labels from 11 to further.

What version of the product are you using? On what operating system?
0.1

Original issue reported on code.google.com by [email protected] on 10 Oct 2011 at 1:29