bowhan Goto Github PK

azimuth

Machine Learning-Based Predictive Modelling of CRISPR/Cas9 guide efficiency

bam-readcount

count DNA sequence reads in BAM files

bcftools

This is NOT the official development repository for BCFtools. See installation instructions and other documentation here http://samtools.github.io/bcftools/howtos/install.html

beego

beego is an open-source, high-performance web framework for the Go programming language.

bgolib

Misc useful Go modules

bowtie

Add native gzip/bzip2 support to Bowtie 1.01

bowtie2

A fast and sensitive gapped read aligner

buildessential

calib

Calib clusters barcode tagged paired-end reads based on their barcode and sequence similarity.

cas-offinder

This is a Fork

circos_converter

Playing with biocircos < http://bioinfo.ibp.ac.cn/biocircos >

cloud9_docker

Build Docker image for cloud9

complete-striped-smith-waterman-library

coursera-neural-style-transfer

Art generation using Neural Style Transfer technique

cppplay

To experiment with C++ features

cufflinks

This is NOT the official cufflinks!!!

drmaa_cpp

C++ Wrapper of the DRMAA C library

edlib

Lightweight, super fast C/C++ (& Python) library for sequence alignment using edit (Levenshtein) distance.

gclib

GCLib - genomic C++ code library for some of my Bioinformatics projects

gffcompare

classify, merge, tracking and annotation of GFF files by comparing to a reference annotation GFF

gffread

GFF/GTF utility providing format conversions, region filtering, FASTA sequence extraction and more

gfftools

htseq-count

This is a clone from http://www-huber.embl.de/users/anders/HTSeq

htslib

C library for high-throughput sequencing data formats

kent

lineardesign

The LinearDesign mRNA design software.

minimap2

A versatile pairwise aligner for genomic and spliced nucleotide sequences

parasail

Pairwise Sequence Alignment Library

pipipes

piRNA pipeline collection developed in the Zamore Lab and ZLab in UMass Med School

rncc

An R package to collapse UMI using hamming distance