Often we want to preserve original files. One option is to copy them away and then ano

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Sample usage, taken from change in <a class="issue-link js-issue-link" data-error-text

Add option to write anonymized files to another directory about dicognito HOT 2 CLOSED

blairconrad commented on May 31, 2024

Add option to write anonymized files to another directory

from dicognito.

Comments (2)

blairconrad commented on May 31, 2024

@paulsbduncan, you have any concerns or proposed refinements?

from dicognito.

blairconrad commented on May 31, 2024

Sample usage, taken from change in #71:

λ  dicognito --output-directory D:\bconrad\ct\anonymized D:\bconrad\ct\boring\
Accession Number Patient ID       Patient Name
---------------- ----------       ------------
RWNNWL3YRVGI     9XNQLS9IFPA1     WHITAKER^JEREMY^HEIDI


λ  dicognito --output-directory D:\bconrad\ct\anonymized D:\bconrad\ct\boring\
Accession Number Patient ID       Patient Name
---------------- ----------       ------------
USSJZARLDTDG     XIU96B1GFZUG     JARVIS^LON^SAMANTHA


λ  ls D:\bconrad\ct\anonymized\


    Directory: D:\bconrad\ct\anonymized


Mode                LastWriteTime         Length Name
----                -------------         ------ ----
-a----       2019-09-20     06:36         594700 2.20190920103608994501.10000001.77410707060721307170327253798445.dcm
-a----       2019-09-20     06:36         594700 2.20190920103608994501.10000005.92621630315726991533585633084704.dcm
-a----       2019-09-20     06:36         594700 2.20190920103608994501.10000007.25211133613081688816170494236413.dcm
-a----       2019-09-20     06:36         594700 2.20190920103608994501.10000009.25807254577686233925286015485518.dcm
-a----       2019-09-20     06:36         594700 2.20190920103608994501.10000011.31752929879687231342606089515018.dcm
-a----       2019-09-20     06:36         594740 2.20190920103610948697.10000001.60829507266605372403378481388168.dcm
-a----       2019-09-20     06:36         594740 2.20190920103610948697.10000005.91372114933410869199296321931975.dcm
-a----       2019-09-20     06:36         594740 2.20190920103610948697.10000007.89249609723942397627118046651056.dcm
-a----       2019-09-20     06:36         594740 2.20190920103610948697.10000009.93799075566467791975107927690782.dcm
-a----       2019-09-20     06:36         594740 2.20190920103610948697.10000011.23931829608822035138222256704308.dcm


λ  summarize_dicom.py D:\bconrad\ct\anonymized
PatientID     PatientName            AccessionNumber
------------  ---------------------  ---------------
9XNQLS9IFPA1  WHITAKER^JEREMY^HEIDI  RWNNWL3YRVGI
XIU96B1GFZUG  JARVIS^LON^SAMANTHA    USSJZARLDTDG