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accelerate

Embedded language for high-performance array computations

accelerate-llvm

LLVM backend for Accelerate

aeson-picker

Tiny Haskell library to get fields from JSON format

alphafold

Open source code for AlphaFold.

anbase

Database of antibody-antigen complexes designed especially for the validation of the docking algorithms.

ankh

Ankh: Optimized Protein Language Model

bcd-az-rm

A simple nodejs application for docs

bcd-config

Library with types and load functions for configs.

bcd-log

Tiny library for the logging with Biocad format

bcd_mcts

A set of tools related to Monte-Carlo Tree Search.

career

Список вакансий в Департаменте Вычислительной Биологии в компании BIOCAD

chemnext-trainee-test-case

Test case for 2024 Winter Internship

cobot

Computational biology toolkit to collaborate with researchers in constructive protein engineering

cobot-io

Biological data file formats and IO

cookiecutter-data-science

A logical, reasonably standardized, but flexible project structure for doing and sharing data science work.

csm

cuba

🏖️ The EGF Collection of Useful Bio Apps - Web demos of EGF software

cuq

CUDA multi-GPU concurrent tasks queue

db-mongo-wrapper

Library for simplification of interaction with MongoDB

deeprank

Deep learning framework for data mining protein-protein interactions using CNN

deeprank-gnn

Graph Network for protein-protein interface

diffdock-pp

Implementation of DiffDock-PP: Rigid Protein-Protein Docking with Diffusion Models in PyTorch (ICLR 2023 - MLDD Workshop)

disjoint-set

Disjoint Sets in Haskell

dproq

Deep learning prediction of protein complex structure quality

enqa

A 3D-equivariant neural network for protein structure accuracy estimation

equidock_public

EquiDock: geometric deep learning for fast rigid 3D protein-protein docking

git-practice

hasbolt-extras

Extras for hasbolt library

how-to

Описание практик и методик ведения проектов

icfpc2015

BIOCAD solution of ICFP Contest 2015