berberto Goto Github PK

acp

Tree for the Advanced Computational Physics course (MSc Trento - Italy)

alepython

Python Accumulated Local Effects package

bash-config

cooperative_search

Mean-field solution for cooperative search games -- diffusive agents with costs on control, time and collisions.

deepkoopman

neural networks to learn Koopman eigenfunctions

deepmind-research

This repository contains implementations and illustrative code to accompany DeepMind publications

dm_control

DeepMind's software stack for physics-based simulation and Reinforcement Learning environments, using MuJoCo.

dynamax

State Space Models library in JAX

eikonal_rl

Actor-critic algorithm for multi-agent 2d confinement problem with control over direction

es_exercise

failures

Neural networks with synaptic failures.

glm-hmm

Code to reproduce figures for "Mice alternate between discrete strategies during perceptual decision-making" from Ashwood, Roy, Stone, IBL, Churchland, Pouget and Pillow (2021)

graphmdp

Kullback-Leibler regularized shortest path on a random graph from RNA velocity data

graphs

Giant component and phase transitions in random graphs

grn-control

Code for A. Pezzotta, J. Briscoe "Optimal control of gene regulatory networks for morphogen-driven tissue patterning"

ibl-serotonin

keras-rl

Deep Reinforcement Learning for Keras.

multitask

Code for Task representations in neural networks trained to perform many cognitive tasks

neuraltube

Simulations of signalling and GRN for dorso-ventral patterning of the vertebrate neural tube.

nt_vertex

Tissue mechanics, signalling and patterning in neural tube development

polymer_cylinder

Optimal control solution for conditioning of a random walk with exponentially distributed jump size in a cylinder

prior-localization

Project seeking to localize encoding of the task prior in the brain

pysindy

A package for the sparse identification of nonlinear dynamical systems from data

rnn_multitask

pytorch implementation of multitask training of RNN

scikit-learn

scikit-learn: machine learning in Python

scipy

Scipy library main repository

scripts

Some useful scripts

simulations

'Simulations' exam @ SISSA

sindy-autoencoder-cps

sindyautoencoders