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benygood

Config files for my GitHub profile.

benygood.github.io

cogvlm

a state-of-the-art-level open visual language model | 多模态预训练模型

datastructure-algorithmn

deconv

deep-learning-notes

Experiments with Deep Learning

diffdock

Implementation of DiffDock: Diffusion Steps, Twists, and Turns for Molecular Docking

diffusion

Denoising Diffusion Probabilistic Models

dynamicbind

repo for DynamicBind: Predicting ligand-specific protein-ligand complex structure with a deep equivariant generative model

efficient-pytorch

My best practice of training large dataset using PyTorch.

electron_density_gen_by_diffusion

electron_density_generation

equiformer

[ICLR'23 Spotlight] Equiformer: Equivariant Graph Attention Transformer for 3D Atomistic Graphs

gitskills

image2lmdb

Convert image folder to lmdb, adapted from Efficient-PyTorch

latent-diffusion

High-Resolution Image Synthesis with Latent Diffusion Models

llama

Inference code for LLaMA models

mycar_server

neuralplexer

NeuralPLexer: State-specific protein-ligand complex structure prediction with a multi-scale deep generative model

openbiomed

pointnet2

PointNet++: Deep Hierarchical Feature Learning on Point Sets in a Metric Space

pointnet_pointnet2_pytorch

PointNet and PointNet++ implemented by pytorch (pure python) and on ModelNet, ShapeNet and S3DIS.

pointr

[ICCV 2021 Oral] PoinTr: Diverse Point Cloud Completion with Geometry-Aware Transformers

psi4

Open-Source Quantum Chemistry – an electronic structure package in C++ driven by Python

pyscf

Python module for quantum chemistry

sonnet

TensorFlow-based neural network library

targetdiff

The official implementation of 3D Equivariant Diffusion for Target-Aware Molecule Generation and Affinity Prediction (ICLR 2023)

tensorflow

An Open Source Machine Learning Framework for Everyone

test

just learn git

torsional-diffusion

Implementation of Torsional Diffusion for Molecular Conformer Generation (NeurIPS 2022)