Name: Brian Fulton-Howard
Type: User
Company: Mount Sinai Hospital (@marcoralab)
Bio: Senior Scientist in Alison Goate's lab at Mount Sinai in NY. Most lab work has been moved to a central repository: http://bit.ly/goategit
Location: New York, NY
Brian Fulton-Howard's Projects
Github Action to deploy conda package to Anaconda repository
Conda recipes for the bioconda channel.
Estimation of trans-ancestry PRS
A docker container for FileBot
Docker Templates for UnRaid
A docker container with the whole htslib family
A docker for the Eagle phasing software
Modified Frigate docker with neolink
GENESIS environment for GWASampleFiltering
A docker container for gnomix local ancestry inference
Docker for MLR
Docker container for running OpenADMIXTURE
R environment for GWASampleFiltering
Docker for Ruth HWE
Find reference mismatches in PLINK filesets and fix them.
Snakemake profile for running jobs on an LSF cluster
Parse LSF stdout files and tabulate key measures
Rapid builds of small Conda-based containers using micromamba.
Miller is like awk, sed, cut, join, and sort for name-indexed data such as CSV, TSV, and tabular JSON
A conda-smithy repository for miller.
Singularity version of Minerva VSCode script
Environment Modules: provides dynamic modification of a user's environment