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lcoombe avatar lcoombe commented on June 1, 2024

Hi Théo,

That is quite strange! What version of goldrush are you using, and what conda build? (You can find that with conda list)
If you run which bc, what path do you see?

Also, could you share your full command and standard out/error with us?

Thank you for your interest in GoldRush!
Lauren

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thdurand4 avatar thdurand4 commented on June 1, 2024

Hello

When i use conda list command i see this :

goldrush 1.0.3 py38h2494328_1 bioconda

which bc : /usr/bin/bc

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thdurand4 avatar thdurand4 commented on June 1, 2024

Ohhhhh i think i got it,

I use a cluster to launch Goldrush and i just saw when i am on a node bc command doesn't exist but when i am on master its work that strange !

I will try to fix it.

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lcoombe avatar lcoombe commented on June 1, 2024

Ok great!
Yeah, was asking about the version because I only added bc as a conda dependency in the build 1.0.1_1 - so if you're using GoldRush on a node without bc installed using that updated conda recipe should also fix it!

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