Access ABCD study data with the guide of domain experts that created this resource.
Docker v17 is required to deploy this container.
First, install docker
apt-get install docker
Then build the container:
docker build . -t deap
Instead of building the docker container manually, you can also use the CI build on https://hub.docker.com/r/haukebartsch/deap/.
A script is provided to launch the container, run. For usage instructions, run it with no arguments.
Provide a directory that is outside of the docker container to store the volatile data (analysis scripts and new measures). At the first startup this directory should also contain a single Rds file which contains the data as processed by https://github.com/ABCD-STUDY/analysis-nda.
mkdir -p assets
cp <data nda18.Rds> assets/
./run deap deap 80 `pwd`/assets
With access to an existing DEAP server you can also download its Rds file with the link: /code/php/getData.php. This only works of you have authenticated previously in the same session with a valid user.
To visualize the development process of DEAP you can run gource:
gource --file-filter "MathJax-2.7.4" \
--file-filter "ModelBuilder/js" \
--file-filter "octicons" \
--file-filter "node_modules" \
--file-filter "ModelBuilder/css" \
--file-filter "ace/" \
--file-filter "pretty/" \
-a 1 -1280x720 \
--seconds-per-day 1 \
-o - | ffmpeg -y -r 60 -f image2pipe \
-vcodec ppm -i - -vcodec libx264 \
-preset ultrafast -pix_fmt yuv420p \
-crf 1 -threads 0 -bf 0 deap.mp4
(RRID: SCR_016158)