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The level of statistical significance is often expressed as a p -value . How to Calculate P Value and mark Significance Levels to grafify? ggpubr or ggsignif plugin??

Looking Forward to Hearing from You

I am having difficulty plotting with grafify due to the call to guide_axis, which it appears from here is only an internal function in ggplot2:

Here is the error message:
Error in guide_axis(angle = { : could not find function "guide_axis"

Is the appropriate recourse to copy the function from ggplot?

Hi @ashenoy-cmbi! Is there a way to use grafify plotting functions but base the color on a variable that is not the X axis variable? For example, I have a tibble with a column that represents individual tissues that I want to use as the x-axis, and another column that groups those tissues into organs/systems that I would like to use for the colors/fills.

Thank you for your help!

Hi

We are in the process of preparing the next release of ggplot2 and our reversen dependency tests show an issue with grafify. The core of the issue seems to be that the ggplot2 calls are full of double braces where they have no meaning, and internal changes have now made this an error. To be clear, this is not a change in functionality, rather before the use of double braces were a no-op, where-as now they throw an error. There are very few places were tidy evaluation makes sense in ggplot2 and where double braces are meaningful, and those are inside aes() and inside vars().

We plan to submit ggplot2 by the end of October and hope you can provide a fix in time

kind regards
Thomas