andkov / emosa Goto Github PK

So the proportions can't exceed [0, 1]

One single document with three series of equations.

Also save the Word document as a PDF, and have them in the /Documentation directory in the repository. Be really specific with subscripts, so to minimize translation errors for the JAGS model.

"Diffusion.R" executes fine, reaching the data at the end of the links.
however, when run from "Diffusion.rmd" the connection fails:

Warning: cannot open file
'C:/Users/inspirion/Documents/GitHub/EMOSA/DiffusionOnly/Data/SummaryBirthYearByTime.csv':
No such file or directory
Error: cannot open the connection

change the distribution from ~dcat to ~dbin.

It uses ggplot2 to graph the MCMC results.

http://martynplummer.wordpress.com/2012/10/21/ggmcmc-diagnostic-plots-for-mcmc-with-ggplot2/#more-189

Try to use existing run to estimate the DIC.

If that doesn't work, the worst case is to uncomment the DIC line of code (which will take twice as long to run)

(...or possibly proportions).

Andrey's self-prompt: "...Proportions of what?"

Most likely focusing histograms in ggplot2. Kernel of the code that Andrey will complete.

It's a little more complicated than I thought.

Instead of the proportions hard-coded in the *.R file.

Make sure it's not too wacky. (It helps that it's consistent with the versions that used Gaussian likelihood).