amathelier / dnashapedtfbs Goto Github PK
View Code? Open in Web Editor NEWTraining and using TFFM/PSSM/4-bits + DNA shape classifiers
License: GNU Lesser General Public License v3.0
Training and using TFFM/PSSM/4-bits + DNA shape classifiers
License: GNU Lesser General Public License v3.0
No such file or directory
to read0.HelT.wig.bwnh/NCKH/DNAshapedTFBS/test/DNAShape
Traceback (most recent call last):
File "../DNAshapedTFBS.py", line 225, in
arguments.func(arguments)
File "/home/vodanh/NCKH/DNAshapedTFBS/DNAshapedTFBS.py", line 156, in pssm_apply_classifier
apply_classifier(hits, argu)
File "/home/vodanh/NCKH/DNAshapedTFBS/DNAshapedTFBS.py", line 125, in apply_classifier
argu.second_shape, argu.extension, argu.scaled)
File "/home/vodanh/NCKH/DNAshapedTFBS/shapes.py", line 73, in get_shapes
hits_shapes.append(get_scores(out_file, shapes[indx], scaled))
File "/home/vodanh/NCKH/DNAshapedTFBS/shapes.py", line 7, in get_scores
with open(in_file) as stream:
IOError: [Errno 2] No such file or directory: '/tmp/tmpkDgYpg.HelT'
Can u help me?
I find it difficult to install this tool, can you help me?
You can write step by step, help me, plz?
thanks you
Apparently the program needs the tool "Bwtool" to work correctly. It should be added in the requirements part.
https://github.com/CRG-Barcelona/bwtool/wiki
A declarative, efficient, and flexible JavaScript library for building user interfaces.
๐ Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. ๐๐๐
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google โค๏ธ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.