Tip
Visit the latest documentation at https://rafaqz.github.io/DimensionalData.jl/dev/
DimensionalData.jl provides tools and abstractions for working with datasets that have named dimensions, and optionally a lookup index. It provides no-cost abstractions for named indexing, and fast index lookups.
DimensionalData is a pluggable, generalised version of AxisArrays.jl with a cleaner syntax, and additional functionality found in NamedDims.jl. It has similar goals to pythons xarray, and is primarily written for use with spatial data in Rasters.jl.
Important
INSTALLATION
julia>]
pkg> add DimensionalDataStart using the package:
using DimensionalDataThe basic syntax is:
A = DimArray(rand(50, 31), (X(), Y(10.0:40.0)));Or just use rand directly, which also works for zeros, ones and fill:
A = rand(X(10), Y(10.0:20.0))╭───────────────────────────╮
│ 10×11 DimArray{Float64,2} │
├───────────────────────────┴──────────────────────────────── dims ┐
↓ X,
→ Y Sampled{Float64} 10.0:1.0:20.0 ForwardOrdered Regular Points
└──────────────────────────────────────────────────────────────────┘
10.0 11.0 12.0 13.0 14.0 … 16.0 17.0 18.0 19.0 20.0
0.71086 0.689255 0.672889 0.766345 0.00277696 0.773863 0.252199 0.279538 0.808931 0.783528
0.934464 0.815631 0.815715 0.890573 0.158584 0.304733 0.936321 0.499803 0.839926 0.979722
⋮ ⋱ ⋮
0.935495 0.460879 0.0218015 0.703387 0.756411 … 0.431141 0.619897 0.0536918 0.506488 0.170494
0.800226 0.208188 0.512795 0.421171 0.492668 0.238562 0.4694 0.320596 0.934364 0.147563Note
Subsetting by index is easy:
A[Y=1:10, X=1]╭────────────────────────────────╮
│ 10-element DimArray{Float64,1} │
├────────────────────────────────┴─────────────────────────── dims ┐
↓ Y Sampled{Float64} 10.0:1.0:19.0 ForwardOrdered Regular Points
└──────────────────────────────────────────────────────────────────┘
10.0 0.130198
11.0 0.693343
12.0 0.400656
⋮
17.0 0.877581
18.0 0.866406
19.0 0.605331We can also subset by lookup, using a Selector, lets try At:
A[Y(At(25))]╭────────────────────────────────╮
│ 50-element DimArray{Float64,1} │
├────────────────────────── dims ┤
↓ X
└────────────────────────────────┘
1 0.5318
2 0.212491
3 0.99119
4 0.373549
5 0.0987397
⋮
46 0.503611
47 0.225421
48 0.293564
49 0.976395
50 0.622586There is also Near (for inexact/nearest selection), Contains (for Intervals containing values),
Between or .. for range selection, and Where for queries, among others.
Plotting with Makie.jl is as easy as:
using GLMakie, DimensionalData
boxplot(rand(X('a':'d'), Y(2:5:20)))And the plot will have the right ticks and labels.
Note
Recent changes have greatly reduced the exported API.
Previously exported methods can me brought into global scope by using
the sub-modules they have been moved to - LookupArrays and Dimensions:
using DimensionalData
using DimensionalData.LookupArrays, DimensionalData.DimensionsImportant
Alternative Packages
There are a lot of similar Julia packages in this space. AxisArrays.jl, NamedDims.jl, NamedArrays.jl are registered alternative that each cover some of the functionality provided by DimensionalData.jl. DimensionalData.jl should be able to replicate most of their syntax and functionality.
AxisKeys.jl and AbstractIndices.jl are some other interesting developments. For more detail on why there are so many similar options and where things are headed, read this thread.
The main functionality is explained here, but the full list of features is listed at the API page.
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